Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1 192 5e-44 seq306 118 9e-22 >seq1 Length=2218769 Score = 192 bits (212), Expect = 5e-44 Identities = 379/558 (68%), Gaps = 7/558 (1%) Strand=Plus/Plus Query 4540 ACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAA 4599 |||| | |||||||||||| ||||| || ||||| | | ||||||| || || || | Sbjct 2182041 ACAACAGGCACGCAAAATCAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGA 2182100 Query 4600 ACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAG 4659 |||| | || ||||| | ||| || || || ||||| ||||| | ||||| || || | Sbjct 2182101 ACGTCAGGCCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGGAGCCGG 2182160 Query 4660 AAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTT 4719 | |||||||||||||| || || || || || || | || | |||||| | | | Sbjct 2182161 AGAAGAATATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGGATTCCT 2182220 Query 4720 TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779 |||| ||||||| | |||||||| ||| ||||| |||| || || || || | | Sbjct 2182221 TGTCAGAAATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGA 2182280 Query 4780 TAGCGTTAAATAATT--TACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAG 4837 | || | || || | | | || | | |||| | || || ||||| || || || Sbjct 2182281 TCGCATCGAACAAATGGTCCCGTTGT--TGTTGGTCCTTGATGTATGTGTCAATGAGCAG 2182338 Query 4838 GCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGC 4897 || | || ||||| || || || || |||||| || ||||||||||| | || Sbjct 2182339 AGAGTATGTCTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGCAGCGCGC 2182398 Query 4898 TTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTC 4957 || | ||||| |||||||| |||| | || || | || ||||| || || || || Sbjct 2182399 CTCAGCGACTTGCACTTCGTTTGAAAAGCGCTCCACGAGATTCTCGTTCACAATGCCATC 2182458 Query 4958 ACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTT---AAG 5014 | | || || || || | ||||||||| ||||||||| | |||||| || | | Sbjct 2182459 GGAGCCAGCGAAGAAGGCAAGAACATGAGAGATAAAGTACCGCTCGTCATCATTCAAACG 2182518 Query 5015 TTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGC 5074 |||| ||||| | ||| | | | |||| ||||| ||||||| || || || Sbjct 2182519 CTTTTCCCAGTCCCAGATATCATGCGAGAGGTCAATCTCTTCTGCAGTCCAGAAGGAGGC 2182578 Query 5075 TTCCGCTTTTTTGTACAT 5092 || ||||| |||||||| Sbjct 2182579 CTCTGCTTTCTTGTACAT 2182596 >seq306 Length=1616116 Score = 118 bits (130), Expect = 9e-22 Identities = 364/555 (66%), Gaps = 11/555 (2%) Strand=Plus/Plus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 ||||||||||| || |||| || || || | || ||||| || || || ||||| Sbjct 904148 AAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGTC 904207 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 | || ||||| | || | ||| || ||||| || || | ||||| |||||||| ||| Sbjct 904208 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAAG 904267 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTC 4723 || ||||| ||||| || ||||| || || | ||| | || | || | || || Sbjct 904268 AAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTC-TTATC 904326 Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783 |||||| |||||||||| ||| || ||||| | || || || |||| || || Sbjct 904327 CGAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGC 904386 Query 4784 GTTAAATA-ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 || ||| | || | || | | | ||||| | || ||||| || || || ||| | Sbjct 904387 GTCAAAGAGATGTTCTCGCTGCTGA-GGGTCCTTGATGTAAGTATCGATGAGAAGGGAGT 904445 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 | | || || || || || || || ||||| || || || ||||||| ||||||| Sbjct 904446 ATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTCTG 904505 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 | || || || || | || | || || | || ||||| || || || || | Sbjct 904506 CAGCCTGTACCTCATTGGAGAACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGACG 904565 Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGT---ACTGTTCGTCAGGCTTAA--GTTT 5017 | ||||| ||||| | |||||| || | |||| || |||| | | || | || Sbjct 904566 CAGCAAAGAACGCGAGAACATGCGAAAGGAAGTGTCTCTCGCCGTC--GTTCAAGCGGTT 904623 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077 ||||||| ||| || || | || |||| || || | ||||| || || || || Sbjct 904624 GTTCCAGTCATGCAGGTCCTTCGATAGGTCAATCTCCTCCATCGTCCAGAAAGAAGCCTC 904683 Query 5078 CGCTTTTTTGTACAT 5092 || || || ||||| Sbjct 904684 GGCCTTCTTATACAT 904698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047726319880