Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taiwanofungus_20camphoratus_20[genbank_20GCA_5F000766995.1_202014- 10-15] 360 sequences; 32,155,604 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq306 187 3e-42 seq1 152 7e-32 >seq306 Length=1616116 Score = 187 bits (206), Expect = 3e-42 Identities = 385/565 (68%), Gaps = 16/565 (3%) Strand=Plus/Plus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 ||||| ||||| || || | || ||||| | ||| || | || || || || || Sbjct 904148 AAACACGCAAAGTCGGTGTGCATGCCCTCATCACGACTTATCAGCTCATTCGAGAACGTC 904207 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 ||||| ||||| || ||||| || |||||||| || || | ||| || || ||||| ||| Sbjct 904208 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAAATGGACGCAAAGGACCCAGAGAAG 904267 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG-CTTCGT-TGT 48315 || ||||| ||||| || ||||| || |||| ||| | | | | |||| | | Sbjct 904268 AAAATGCCCTCTACTGCAGCAAAGGCAACGAGTCGCTCAGCAAATGTAGACTTCTTATCC 904327 Query 48316 GTA-TCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 48374 | | ||||||| |||||| |||||||||||||| | |||||| || || || || || Sbjct 904328 GAAATCCACCGCAATGCCCAGTCAGCCTTCTTCTTGATACAAGGGATGGTGTCAATGGCG 904387 Query 48375 TTAAAGAGAAAGtttttttCATTGCTA----TCTTTAACGTAAGTATCTATTAAAAGACT 48430 | ||||||| | || || |||| || || | ||||||||| || | ||| Sbjct 904388 TCAAAGAGA----TGTTCTCGCTGCTGAGGGTCCTTGATGTAAGTATCGATGAGAAGGGA 904443 Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490 || | ||||||||||| || || || ||||| || || || || |||| |||||| Sbjct 904444 GTATGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGCGCTTC 904503 Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 || ||||||||| | | || || ||| | | |||||| || || || ||||| Sbjct 904504 TGCAGCCTGTACCTCATTGGAGAACCGCTCAACGAGATTCTCGTTGACAATGCCATCCGA 904563 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTT 48607 |||||||| || || | ||||| || || | | | ||| | ||| | || Sbjct 904564 CGCAGCAAAGAACGCGAGAACATGCGAAAGGAAGTGTCTCTCGCCGTCGTTCAAGCGGTT 904623 Query 48608 ATTCCAGTCATTGATATCTTTTGATATATCTA-CTTCTTCAGCTGTCCAAAATGATGCCT 48666 |||||||||| | || || |||| || | || || || | ||||| || || |||| Sbjct 904624 GTTCCAGTCATGCAGGTCCTTCGATAGGTCAATCTCCTCCATC-GTCCAGAAAGAAGCCT 904682 Query 48667 CTGCTTTTTTATACATATTCCATAT 48691 | || || |||||||| | ||| || Sbjct 904683 CGGCCTTCTTATACATCTGCCAGAT 904707 >seq1 Length=2218769 Score = 152 bits (168), Expect = 7e-32 Identities = 371/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || ||||||||| ||| | || || || | |||| | || || || || || || Sbjct 2182049 CACGCAAAATCAGTATGCATTCCCTCGTCGCGGATAATCAGCTCATTGGAGAACGTCAGG 2182108 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || ||||| || || | ||| |||||||| ||||| | || || || || || |||||| Sbjct 2182109 CCAGGCATGAGACCCCTTTTCTTGAGCCAGAATATGGATGCAAAGGAGCCGGAGAAGAAT 2182168 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT---GT 48317 |||||||| || ||||| || ||| ||| | ||| || | ||| ||| |||| Sbjct 2182169 ATGCCTTCGACAGCCGCGAAAGCGACAAGCCGCTCCGCGAACGTGGATTCCTTGTCAGAA 2182228 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 ||||| || ||||||| |||||||| || || | ||| || || || || || |||| Sbjct 2182229 ATCCATCGCAGTGCCCAGTCAGCCTTTTTTTTAATACATGGGATGGTCTCGATCGCATCG 2182288 Query 48378 AAGAGAAAGtttttttCATTGCT-ATCTTTAACGTAAGTATCTATTAAAAGACTATACAT 48436 || | || | | | ||| | || || | ||| || || || | ||| || | Sbjct 2182289 AACA-AATGGTCCCGTTGTTGTTGGTCCTTGATGTATGTGTCAATGAGCAGAGAGTATGT 2182347 Query 48437 TTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGAT 48496 ||||| ||||| || || || ||||| || |||||||| || | ||| || | || Sbjct 2182348 CTCGGAATGAATGTTCTCCATCATAATCTGGAAGCCGTAAAAGCAGCGCGCCTCAGCGAC 2182407 Query 48497 CTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGC 48556 || || || | |||| || || | | |||||| || || || ||||| |||| Sbjct 2182408 TTGCACTTCGTTTGAAAAGCGCTCCACGAGATTCTCGTTCACAATGCCATCGGAGCCAGC 2182467 Query 48557 AAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTATTCCA 48613 || || || | ||||| ||||| || |||| | ||| | || | ||| Sbjct 2182468 GAAGAAGGCAAGAACATGAGAGATAAAGTACCGCTCGTCATCATTCAAACGCTTTTCCCA 2182527 Query 48614 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTT 48673 ||| |||||| | || | || | ||||| || ||||| || || ||||||||||| Sbjct 2182528 GTCCCAGATATCATGCGAGAGGTCAATCTCTTCTGCAGTCCAGAAGGAGGCCTCTGCTTT 2182587 Query 48674 TTTATACATATTCCATAT 48691 || ||||| |||| || Sbjct 2182588 CTTGTACATCCTCCAGAT 2182605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665673990400