Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq120 168 7e-37 >seq120 Length=370717 Score = 168 bits (186), Expect = 7e-37 Identities = 386/577 (67%), Gaps = 7/577 (1%) Strand=Plus/Minus Query 16184 AGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGT 16243 ||||| | || | |||||| || || || || || |||||||| | ||||| ||| Sbjct 289789 AGGTGGGTGAATAATAGACATGCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGT 289730 Query 16244 TCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA 16303 || ||||| ||||| | || ||||| || || ||||| | ||| || || |||||| Sbjct 289729 TCATTGGAGAAAGTGAGACCAGGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCA 289670 Query 16304 AATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTAC 16363 || ||||| || || ||||| || || |||| |||||||| | | ||||||||| | Sbjct 289669 AAGGACCCAGAGAAAAATATTCCTTCTACAGCGGCAAAAGCAACAAGTCGTTCCGCAAAG 289610 Query 16364 GTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCC 16423 || | | || | |||||| | | |||| || ||||| | || | ||| Sbjct 289609 GTGGACTGTTGGTCTGATATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAG 289550 Query 16424 ATCGTTTCTATGGCCTTAAACA-ATTTCTCTTTT-TCCTGAATATCGATTATATACGTAT 16481 || ||||| ||||| | || | || | || || | ||| || | | || || || | Sbjct 289549 ATGGTTTCGATGGCGTCGAATAGATGTTTCCGTTCTTCTGGAT--CCTTGATGTAGGTGT 289492 Query 16482 CAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGA 16541 | || |||| | ||| |||| ||||| | || || || ||| || || || |||| Sbjct 289491 CGATAAGTAGAGAGTAAGTTTCCGAGTGAACATTTTCCATCATTATTTGGAAGCCGTAGA 289432 Query 16542 AGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCA 16601 |||| || || || |||| || | ||| | | |||||||| ||||||||||||| Sbjct 289431 AGCACCGTGCTTCAGCTACCTGAATTTCACTGGAGAATCGTTCAAGGAGGTTCTCATTCA 289372 Query 16602 CGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAG 16661 | || ||||| |||||||| || || | | ||| |||||||| |||| | Sbjct 289371 CAATGCCGTCGGAAGCAGCAAAGAATGCGAGGACGTGAGAGATGAAATACCGTTCGCTGG 289312 Query 16662 ATGTAAGAATATG---CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCC 16718 | | || |||| |||||| | | ||| | | | | ||| | ||| |||| |||| Sbjct 289311 AGTTGAGCTTATGATTCCAATCCATGAGATCGTGGCAGAGATCTATTTCCTCTGCGGTCC 289252 Query 16719 AAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 |||| ||| |||||||||||| | ||||| || Sbjct 289251 AAAATGACGCCTGTGCCTTTTTATAAAAATTCCATAT 289215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511399473092200