Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq120 268 1e-66 seq666 131 2e-25 seq641 129 6e-25 >seq120 Length=370717 Score = 268 bits (296), Expect = 1e-66 Identities = 457/657 (70%), Gaps = 17/657 (3%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||||||||| || || || |||||||| | |||||| |||| || Sbjct 288107 ATATGGCAAATGTACAAAAAGGCAGAAGCATCCTTCTGGACGGCTGAGGAGATGGATCTT 288048 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||| ||| || ||| | || ||||| |||||||| || ||| | Sbjct 288047 TCCAAGGACCTTTACGATTGGAATGAACGCCTCAATGACAATGAGCGCCACTTTATCTCG 287988 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| |||| ||||| || || ||| ||||| |||||||| || || |||||||| Sbjct 287987 CACGTTTTGGCTTTTTTTGCTGCTTCCGATGGCATTGTCAACGAAAACCTTGTCGAGCGC 287928 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || |||| || || || || || ||||| |||||||||||| ||| Sbjct 287927 TTCTCCAATGAAGTCCAGGCAGCTGAAGCTCGCTGTTTCTATGGCTTTCAGATCATGATG 287868 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 || ||| | || || |||| ||||| ||| || ||||| ||| | | | | Sbjct 287867 GAAAACATTCATTCCGAAACATATTCTCTCCTTATAGACACTTACATCAAGGACCAAGCT 287808 Query 116930 GAG---GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAG 116986 ||| ||| | ||| |||| | |||||||| || || || || | ||| |||| Sbjct 287807 GAGCGCGAGTACCTC--TTTG----ATGCCATCGAAACCATTCCCTGTATTAAACGGAAG 287754 Query 116987 GCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTG 117046 || || ||||| ||| |||||| | | || | | | |||| ||| || | || Sbjct 287753 GCTGAATGGGCTCTGAAGTGGATCTCTGACAAGAACTCTACTTTCGCCGAACGGTTAGTT 287694 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 || || ||||| || || ||| ||||||| || ||| || || | || || ||||| Sbjct 287693 GCATTTGCGGCTGTGGAAGGCATCTTCTTCTCAGGCTCCTTTGCATCAATCTTCTGGCTA 287634 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166 |||||||| || |||||||||||| |||||||| |||||||| ||| | | || ||| Sbjct 287633 AAGAAACGTGGTCTCATGCCCGGCTTGACTTTCTCAAACGAGCTTATCAGCCGTGATGAG 287574 Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCG-ACCGAGCGC 117225 ||| |||| ||||||||| || | || |||| ||| | || || || | | | Sbjct 287573 GGTATGCACACCGACTTTGCATGCCTTCTCTTCAGCCATCTCAAGCGTCGCCCCCAACCC 287514 Query 117226 GGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 | | ||| || || |||| || ||||| ||||||||||| |||||||| Sbjct 287513 GATAC-AATCAAGGCTATTATCACAGAAGCGGTTGCCATCGAGCAAGAGTTCCTCAC 287458 Score = 138 bits (152), Expect = 1e-27 Identities = 362/548 (66%), Gaps = 7/548 (1%) Strand=Plus/Plus Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG 116707 || |||||||| ||||||| || ||||||| ||||| | || || | | | || Sbjct 289227 TATAAAAAGGCACAGGCGTCATTTTGGACCGCAGAGGAAATAGATCTCTGCCACGATCTC 289286 Query 116708 AGCGACTGGGAGC----GCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGC 116763 | || ||| | | ||| ||| || ||| || |||||||| ||||| || || Sbjct 289287 ATGGATTGGAATCATAAGCTC-AACTCCAGCGAACGGTATTTCATCTCTCACGTCCTCGC 289345 Query 116764 CTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAG-G 116822 || || || || ||||||||| || || ||||| || | || || ||| | ||| | Sbjct 289346 ATTCTTTGCTGCTTCCGACGGCATTGTGAATGAGAACCTCCTTGAACGATTCTC-CAGTG 289404 Query 116823 AGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGC 116882 | | ||||| || || || ||||||||||||||||| || || ||||| || || | Sbjct 289405 AAATTCAGGTAGCTGAAGCACGGTGCTTCTACGGCTTCCAAATAATGATGGAAAATGTTC 289464 Query 116883 ACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCC 116942 ||||||||| || || || |||||||| ||| | | | || || | | Sbjct 289465 ACTCGGAAACTTACTCTCTACTTATCGACACCTACATCAAGGATCCAGAAGAACGGAAAC 289524 Query 116943 GTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGC 117002 | | || |||||||||| || || | || ||||| || || || ||||| || Sbjct 289525 ATCTATTCGACGCCATCGAAACCATCTCATGTGTCAAGCGTAAAGCTGACTGGGCTCTTA 289584 Query 117003 GCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCG 117062 | ||||| | | | | || || |||| | || || || || || || || || || | Sbjct 289585 GATGGATATCAGACCAACAGTCCACCTTTGCGGAACGACTTGTTGCTTTTGCCGCTGTAG 289644 Query 117063 AGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCA 117122 | || | || || || || || || || || |||||| ||||||| || || | | Sbjct 289645 AAGGAATATTTTTCTCTGGGTCCTTTGCTGCTATTTTTTGGATCAAGAAGCGTGGTTTGA 289704 Query 117123 TGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACT 117182 |||| || || |||||| ||| || |||||| | ||||| || || || || | Sbjct 289705 TGCCTGGTCTCACTTTCTCCAATGAACTCATCAGTCGCGACGAAGGCCTTCACACGGATT 289764 Query 117183 TTGCCTGT 117190 |||| ||| Sbjct 289765 TTGCATGT 289772 >seq666 Length=522490 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||| | ||||| || ||||| || |||| || ||| | | Sbjct 282467 ATGCAAATTTTCGTCAAGACGTTGACGGGGAAGACCATTACGCTCGAGGTTGAATCGTCG 282408 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| ||||||| ||||| || ||||||||| | ||||| Sbjct 282407 GACACAATTGATAACG-TCAAGGCGAAAATTCAGGACAAGGAAGGCATCCCCCCCGACCA 282349 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| || || |||||||| || |||| ||||| || || ||||| Sbjct 282348 GCAACGCTTGATCTTTGCCGGGAAACAGCTTGAGGACGGCCGCACTCTTTCTGATTACAA 282289 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||| ||| | ||||| ||||| || |||| Sbjct 282288 CATTCAGAAAGAGTCGACGCTCCATCTTGTTCTGCG 282253 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || |||||||| || || || || || | || || || | | Sbjct 282239 ATGCAGATTTTTGTGAAGACGCTCACCGGAAAGACGATTACGTTGGAAGTGGAGTCGTCG 282180 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| | || | || |||| ||||| || || || || | ||||| Sbjct 282179 GACACGATTGACAACG-TGAAAGCGAAGATTCAGGACAAGGAAGGTATTCCGCCTGACCA 282121 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| |||||||| || || || |||| | | || || |||||| || Sbjct 282120 GCAACGCCTAATCTTTGCGGGCAAGCAACTCGAAGACGGGAGGACGCTTTCCGACTATAA 282061 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||| ||||||||| ||| |||||||| Sbjct 282060 CATACAGAAGGAGAGCACCCTGCATCT 282034 >seq641 Length=242067 Score = 129 bits (142), Expect = 6e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || |||||| | || ||||| | | Sbjct 73861 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCATCA 73920 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||||| ||||| | || |||||||| ||||| | || || Sbjct 73921 GATACCATCGACAACG-TCAAGGCTAAAATCCAGGATAAAGAGGGTATCCCTCCTGATCA 73979 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| |||||||| || || || | ||||| ||| ||||||||| Sbjct 73980 ACAACGTCTCATCTTCGCAGGCAAACAACTCGAGGATGGACGCACTCTCTCCGACTACAA 74039 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| || |||| || ||||| || Sbjct 74040 CATCCAGAAAGAATCCACCCTTCATCTCGT 74069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515204162039600