Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq458 107 2e-18 seq641 105 6e-18 seq666 104 2e-17 >seq458 Length=497640 Score = 107 bits (118), Expect = 2e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | |||||||| ||||| |||||||||||||| | ||||| |||||| Sbjct 148003 ACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGCTAAGGGTGCGACCATCCTCA 148062 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| ||||||||| |||| || |||||||| |||||||| || Sbjct 148063 AGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGGAT 148106 >seq641 Length=242067 Score = 105 bits (116), Expect = 6e-18 Identities = 153/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 |||| || || | ||| || || || || || || |||||| | || ||| ||||| Sbjct 74299 CACCGAGATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCT 74240 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | || || || |||||| |||| ||||| || ||||| ||||| || |||||||||||| Sbjct 74239 CAAGTTGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTT 74180 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| || ||||| | |||| ||||| | || || || | ||| | || | Sbjct 74179 GAATCTTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCT 74120 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 |||| |||| ||| || ||||| ||||||||| || Sbjct 74119 TGCCCGTCAAAGTCTTGACAAAGATCTGCATGCCT 74085 >seq666 Length=522490 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || || ||||| |||||||| | || || ||| |||||||||||||| Sbjct 282829 GTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTGTTTTCCG 282888 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||| ||||| || || || || || ||||| ||| || || ||| Sbjct 282889 GCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTTGGTTTTG 282948 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||| || | | ||| ||||| | ||| | || || || |||| || Sbjct 282949 ACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGGTC 283008 Query 118722 TTTACAAAAATCTGCAT 118738 ||||||||||||||||| Sbjct 283009 TTTACAAAAATCTGCAT 283025 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| ||||| | | || || | |||| || |||||||| |||||||||||||| Sbjct 282239 TACCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAG 282298 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | |||||| ||||| |||||||| || || |||| | || ||||| ||||| | Sbjct 282299 AAAGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGG 282358 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| |||||||| |||||| || || | || | ||||||| || | Sbjct 282359 GGATGCCTTCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAA 282418 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || | || || || |||| || || || ||||| ||||| Sbjct 282419 CCTCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || || || || ||||| ||||| || | |||||| ||| || Sbjct 282538 ACCAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTC 282597 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || || || ||| |||| | || ||||||||||||||||| || |||||||| Sbjct 282598 AAGTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTG 282657 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | || | ||||| | || ||||| | || | || || Sbjct 282658 AATCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTT 282717 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||||||| || |||||||| ||||| Sbjct 282718 TCCTGTCAGAGTCTTGACAAAAATTTGCAT 282747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433818054135820