Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq666 102 6e-17 >seq666 Length=522490 Score = 102 bits (112), Expect = 6e-17 Identities = 152/212 (72%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 |||| || ||||| |||||||||||||| ||||| |||||| || | |||| | Sbjct 282029 TACCCAGATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTT 282088 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | ||||| || || || || || | || || ||||| || || | ||| ||||||||| Sbjct 282089 CGAGTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCT 282148 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || |||| || | || | ||||| |||||| |||| ||||||||| Sbjct 282149 GAATCTTC-GCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTC 282207 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||||||||| || ||||| Sbjct 282208 TTTCCGGTGAGCGTCTTCACAAAAATCTGCAT 282239 Score = 102 bits (112), Expect = 6e-17 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 45127 TACCAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGT 45185 ||||||| || || ||| ||||||||||| |||||||| || |||| | || | Sbjct 282537 TACCAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTT 282596 Query 45186 CCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCG 45245 | ||||| || |||||||| ||||| || || || |||||||| | ||| ||||||||| Sbjct 282597 CAAGTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCT 282656 Query 45246 CAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 ||| || ||| || | | |||| || ||||| | || || |||| Sbjct 282657 GAATCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCT 282716 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || ||||||||||| ||||| |||||||| Sbjct 282717 TTCCTGTCAGAGTCTTGACAAAAATTTGCAT 282747 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || ||||| ||| |||||||||||||| || || ||| |||| || | Sbjct 282260 CAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAA 282319 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | ||||| ||||| || ||||| || || |||||||| || | || ||||||||| || Sbjct 282320 GCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGAA 282379 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 |||| ||| || | | ||||| || ||||| | ||||| ||||| | Sbjct 282380 TTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACCTCGAGCGTAATGGTCTTCC 282439 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||| ||||| || || |||||||| Sbjct 282440 CCGTCAACGTCTTGACGAAAATTTGCAT 282467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395063957024035