Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq654 136 8e-27 seq120 105 1e-17 >seq654 Length=437428 Score = 136 bits (150), Expect = 8e-27 Identities = 193/269 (72%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||| | || || ||| | ||||||||||||||| ||| || || | ||| || || Sbjct 48175 ATGGATGTTGAGGCCAATGCCTCCAGCAGTCTTGCTGATCATCGCACATTGCTTGAGGGT 48234 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 |||||||||||| ||||| |||||| | | || | |||||| |||||| ||||| Sbjct 48235 ATCATAAATACCATCAATTGAATCATCCTTCATGCAAACAAGGAAACACGAGCTGAGTTG 48294 Query 94893 -GGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951 || || | ||| ||| ||| || || || || ||||| || || || ||| || | Sbjct 48295 TGGATGAG-GTGTACCAGCATTGAAGAGAGTAGGCGAAGCGTGTGTGAAGTAGCGCTCAG 48353 Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011 |||| |||| ||| || || | |||| || ||||| || |||||||| || || | Sbjct 48354 ACATCAGATTATACGTCTCTAAGACACGTTCAATGTCATCGCCATGAATGCCAACTGCGA 48413 Query 95012 CACGCATAATCATGTCCTGAGGGCGCTCA 95040 ||||||| ||||| | |||||||||||| Sbjct 48414 CACGCATGATCATATGTTGAGGGCGCTCA 48442 >seq120 Length=370717 Score = 105 bits (116), Expect = 1e-17 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 101903 TTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTC 101962 || ||||||| | ||||||| ||||| || || |||||||| || || ||| | || Sbjct 289611 TTTGCGGAACGACTTGTTGCTTTTGCCGCTGTAGAAGGAATATTTTTCTCTGGGTCCTTT 289670 Query 101963 GCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAG 102022 || | ||||| ||||||||||| | ||| | ||||||||||||| | ||||||||| Sbjct 289671 GCTGCTATTTTTTGGATCAAGAAGCGTGGTTTGATGCCTGGTCTCACTTTCTCCAATGAA 289730 Query 102023 TTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATG 102063 |||| | | |||||||| ||||| || |||||||| Sbjct 289731 CTCATCAGTCGCGACGAAGGCCTTCACACGGATTTTGCATG 289771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989554394429925