Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq120 147 2e-30 >seq120 Length=370717 Score = 147 bits (162), Expect = 2e-30 Identities = 295/435 (68%), Gaps = 3/435 (1%) Strand=Plus/Minus Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685 || ||| |||||||| || | |||||||| | ||| || |||||||| || || || Sbjct 289775 TAGACATGCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGT 289716 Query 11686 TAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAA 11745 | || |||||||| || || || || |||||||| ||||||||||| || ||||| || Sbjct 289715 GAGACCAGGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCAAAGGACCCAGAGAA 289656 Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TACCTTGTTGCT- 11802 |||||||| || ||||| ||||| || || | || ||| || | | ||||| | Sbjct 289655 AAATATTCCTTCTACAGCGGCAAAAGCAACAAGTCGTTCCGCAAAGGTGGACTGTTGGTC 289596 Query 11803 AGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGC 11862 ||||||||| | ||||| |||||||| || || ||| || ||||| || || Sbjct 289595 TGATATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGC 289536 Query 11863 GTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922 || |||| ||| | |||| ||| | | || || || || | || | || Sbjct 289535 GTCGAATAGATGTTTCCGTTCTTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTA 289476 Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGA 11982 |||| || |||| ||||||||| |||||| || || ||||| || ||||| || | Sbjct 289475 AGTTTCCGAGTGAACATTTTCCATCATTATTTGGAAGCCGTAGAAGCACCGTGCTTCAGC 289416 Query 11983 ACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGA 12042 ||| | || | |||| ||| | |||||||| ||||| || || || Sbjct 289415 TACCTGAATTTCACTGGAGAATCGTTCAAGGAGGTTCTCATTCACAATGCCGTCGGAAGC 289356 Query 12043 TGCAAAAAATGCTAG 12057 ||||| ||||| || Sbjct 289355 AGCAAAGAATGCGAG 289341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468511124932400