Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq120 176 6e-39 >seq120 Length=370717 Score = 176 bits (194), Expect = 6e-39 Identities = 378/560 (68%), Gaps = 10/560 (2%) Strand=Plus/Minus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 |||||| ||||| ||| || || ||||| | ||| || | ||| ||||| || ||||| Sbjct 289772 ACATGCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAG 289713 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 || ||||| | |||||||| || | |||||| || | ||||| || ||||| || || Sbjct 289712 ACCAGGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCAAAGGACCCAGAGAAAAA 289653 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GTCAT 36332 ||||||||||| || ||||| |||| ||||| || || || | ||| ||| Sbjct 289652 TATTCCTTCTACAGCGGCAAAAGCAACAAGTCGTTCCGCA-AAGGTGGACTGTTGGTCTG 289594 Query 36333 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 36392 |||||| | ||||||| || || || || ||||| | || || || || || | Sbjct 289593 ATATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGT 289534 Query 36393 TAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 36452 || |||| || ||| | ||| || | || || || || | ||| || Sbjct 289533 CGAATAGATGTTTCCGTTCTTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTAAG 289474 Query 36453 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 36512 ||||||| |||| ||||| || ||||| || |||||||| || | || || | | Sbjct 289473 TTTCCGAGTGAACATTTTCCATCATTATTTGGAAGCCGTAGAAGCACCGTGCTTCAGCTA 289414 Query 36513 TCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 36572 ||| | ||| | | |||||||| | || |||||||| || ||||| || | Sbjct 289413 CCTGAATTTCACTGGAGAATCGTTCAAGGAGGTTCTCATTCACAATGCCGTCGGAAGCAG 289354 Query 36573 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT-AGTTT---ATTC 36628 |||| || || | || || || ||||| |||| ||| ||| || || |||| Sbjct 289353 CAAAGAATGCGAGGACGTGAGAGATGAAATACCGTTCG-CTGGAGTTGAGCTTATGATTC 289295 Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688 ||||| ||| ||| | | | ||| | ||| || | ||||||||||| |||| |||| Sbjct 289294 CAATCCATGAGATCGTGGCAGAGATCTATTTCCTCTGCGGTCCAAAATGACGCCTGTGCC 289235 Query 36689 TTTTTATACATATTCCAGAT 36708 |||||||| | |||||| || Sbjct 289234 TTTTTATAAAAATTCCATAT 289215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658153589581400