Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq120 197 1e-45 >seq120 Length=370717 Score = 197 bits (218), Expect = 1e-45 Identities = 368/538 (68%), Gaps = 7/538 (1%) Strand=Plus/Plus Query 13893 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13952 |||||||| | || ||||| |||||||| || || || || ||||| | || ||||| Sbjct 287572 CCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCGGGCATGAGACCACGTTTC 287631 Query 13953 tttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 14012 |||| ||| || |||| ||||| || || || ||||| || || || || || ||||| Sbjct 287632 TTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAGATGCCTTCCACAGCCGCAAAT 287691 Query 14013 GCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCA 14072 || | ||| ||||| | || | | || |||| || ||||| || |||||||||| Sbjct 287692 GCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCAGAGATCCACTTCAGAGCCCATTCA 287751 Query 14073 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTC--TT 14130 | || ||||||| | || ||||| || |||| ||| | || || ||| | Sbjct 287752 GCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATCAAAGAGGTACTCGCGCTCAGCT 287811 Query 14131 TAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCA 14190 | || |||| ||||| || || ||||| | ||| |||| || || |||||||||| Sbjct 287812 TGGTCCTTG--ATGTAAGTGTCTATAAGGAGAGAATATGTTTCGGAATGAATGTTTTCCA 287869 Query 14191 TAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATC 14250 | |||||||| ||||| || || | |||||| | || ||||| | | || | Sbjct 287870 TCATGATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTGCCTGGACTTCATTGGAGAAGC 287929 Query 14251 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14310 ||| | | ||||| || || || ||||| ||| |||||||| ||||| | || Sbjct 287930 GCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAGCAGCAAAAAAAGCCAAAACGTGCG 287989 Query 14311 TAATAAAGTATTGCTC---TTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAA 14367 ||||||| |||| |||||| | ||| ||||||||| | | ||||| |||| Sbjct 287990 AGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATTCCAATCGTAAAGGTCCTTGGAAA 288049 Query 14368 GATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425 |||| | || ||| | ||||| || || | || ||||| |||||| |||||| Sbjct 288050 GATCCATCTCCTCAGCCGTCCAGAAGGATGCTTCTGCCTTTTTGTACATTTGCCATAT 288107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479713997939000