Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq120 181 1e-40 >seq120 Length=370717 Score = 181 bits (200), Expect = 1e-40 Identities = 367/540 (68%), Gaps = 11/540 (2%) Strand=Plus/Plus Query 13681 CCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttt 13740 |||||||| | || ||||| |||||||| || || || || ||||| | || ||||| Sbjct 287572 CCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCGGGCATGAGACCACGTTTC 287631 Query 13741 tttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAAC 13800 |||| ||| || |||| || || || || || ||||| || || || || || ||||| Sbjct 287632 TTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAGATGCCTTCCACAGCCGCAAAT 287691 Query 13801 GCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCA 13860 || | || ||||| | || | | || |||| || ||||| || |||||||||| Sbjct 287692 GCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCAGAGATCCACTTCAGAGCCCATTCA 287751 Query 13861 GAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTCCTTCTC--TT 13918 | || ||||||| | || |||||||| |||| || | | || ||| | Sbjct 287752 GCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATCAAAGAGGTACTCGCGCTCAGCT 287811 Query 13919 TAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTA 13978 | || |||| ||||| || || ||||| | ||| |||| || || |||||||| | Sbjct 287812 TGGTCCTTG--ATGTAAGTGTCTATAAGGAGAGAATATGTTTCGGAATGAATGTTTTCCA 287869 Query 13979 TAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATC 14038 | |||||||| ||||| ||||| | |||||| | || || || | | || | Sbjct 287870 TCATGATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTGCCTGGACTTCATTGGAGAAGC 287929 Query 14039 TTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14098 || | | |||||| || ||||| ||||| ||| |||||||| ||||| | || Sbjct 287930 GCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAGCAGCAAAAAAAGCCAAAACGTGCG 287989 Query 14099 TAATAAAGTATTGCTC---TTCATTGTTGAGTTTTTTCCAATCGGCTAAA--TCCTTAGA 14153 ||||||| |||| |||||| | ||| ||||||||| |||| ||||| || Sbjct 287990 AGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATTCCAATCG--TAAAGGTCCTTGGA 288047 Query 14154 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14213 |||||| | || ||| | ||||| || || | || ||||| |||||| |||||| Sbjct 288048 AAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTTCTGCCTTTTTGTACATTTGCCATAT 288107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478574831189400