Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq120 203 5e-47 >seq120 Length=370717 Score = 203 bits (224), Expect = 5e-47 Identities = 392/568 (69%), Gaps = 28/568 (5%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||||||||| | || ||||| ||||||| || ||| | ||||| Sbjct 288107 ATATGGCAAATGTACAAAAAGGCAGAAGCATCCTTCTGGACGGCTGAGGAGATGGATCTT 288048 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| ||||||||| | || | | ||| | |||||| | ||||| ||| Sbjct 288047 TCCAAGGACCTTTACGATTGGAATGAACGCCTCAATGACAATGAGCGCCACTTTATCTCG 287988 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 ||| ||||||| || ||||| | |||||||| || |||||||| || | ||| || || Sbjct 287987 CACGTTTTGGCTTTTTTTGCTGCTTCCGATGGCATTGTCAACGAAAACCTTGTCGA-GCG 287929 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAG--AGGTG----TCG-TGCTTTTACGGATTCCAAA 125250 ||||| ||| ||| | ||||| || || ||| || || || || || || | Sbjct 287928 CTTCTC-CAA----TGA--AGTCCAGGCAGCTGAAGCTCGCTGTTTCTATGGCTTTCAGA 287876 Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCG 125310 ||||||| || ||| | || || |||| || ||| || || |||| ||||| | Sbjct 287875 TCATGATGGAAAACATTCATTCCGAAACATATTCTCTCCTTATAGACACTTACATCAAGG 287816 Query 125311 ATC---CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTA 125367 | | | | || | || |||||| | || ||||| || | || | ||| || Sbjct 287815 ACCAAGCTGAGCGCGAGTAC---CTCTTTGATGCCATCGAAACCATTCCCTGTAT---TA 287762 Query 125368 AA---AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACA 125424 || |||||| |||||| | ||||||| |||| | || ||| | | |||||| Sbjct 287761 AACGGAAGGCTGAATGGGCTCTGAAGTGGATCTCTGACAAGAACTCTACTTTCGCCGAAC 287702 Query 125425 GACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCT 125484 | | || ||||| || || || || ||||||||||| || || ||||| | |||| Sbjct 287701 GGTTAGTTGCATTTGCGGCTGTGGAAGGCATCTTCTTCTCAGGCTCCTTTGCATCAATCT 287642 Query 125485 TTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTC 125544 | ||||| ||||| || || ||||||||||| |||| | |||||| |||| | Sbjct 287641 TCTGGCTAAAGAAACGTGGTCTCATGCCCGGCTTGACTTTCTCAAACGAGCTTATCAGCC 287582 Query 125545 GAGACGAGGGCCTACACTGTGACTTTGC 125572 | || ||||| | ||| |||||||| Sbjct 287581 GTGATGAGGGTATGCACACCGACTTTGC 287554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741037570334600