Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq666 84.2 2e-11 >seq666 Length=522490 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 43918 ATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTA-ATTGACGCTCATCGTCCAATT 43976 ||| ||||| |||||| ||||| || ||||| | | || || | || || | | Sbjct 282264 ATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGC-CGTCCTCAAGCT 282322 Query 43977 GTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTT 44036 |||| || ||||| ||||| ||||||||||| | || | ||||| || || ||||| Sbjct 282323 GTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCCTGAATTT 282382 Query 44037 TTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGG 44096 | ||||| || ||| || || | || || || |||| |||||| || || || | Sbjct 282383 TCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACCTCGAGCGTAATGGTCTTCCCCG 282442 Query 44097 TTAAAGTCTTCACAAATATTTGCAT 44121 | || ||||| || || |||||||| Sbjct 282443 TCAACGTCTTGACGAAAATTTGCAT 282467 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 || || |||||||| ||||| | | ||| |||| || | |||||||| || || Sbjct 282835 TCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTGTTTTCCGGCGAAG 282894 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 ||||| ||||||||||| | || | |||||| |||||| || || |||||| | Sbjct 282895 ATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTTGGTTTTGACATTG 282954 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 | | ||||| | | |||||| || | || || || || || || || ||||| ||| Sbjct 282955 TCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGGTCTTTACA 283014 Query 44111 AATATTTGCAT 44121 || || ||||| Sbjct 283015 AAAATCTGCAT 283025 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 43914 CCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCA 43973 ||| ||| || |||||||| || || || ||||| ||| | | | | || || | Sbjct 282032 CCAGATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGA 282091 Query 43974 ATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAA 44033 ||| || || ||||| || | ||||||||||| | || | |||||| || || || Sbjct 282092 GTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCTGAA 282151 Query 44034 TTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTAC 44093 | || ||| || | ||| || || | || |||||| || | |||||| || || | Sbjct 282152 TCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTC 282211 Query 44094 CGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||| | ||||||||||| || ||||| Sbjct 282212 CGGTGAGCGTCTTCACAAAAATCTGCAT 282239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354767503805580