Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq120 134 1e-26 >seq120 Length=370717 Score = 134 bits (148), Expect = 1e-26 Identities = 297/441 (67%), Gaps = 6/441 (1%) Strand=Plus/Minus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 |||||||||||| ||| | ||||| || | ||| || || || || || || || || Sbjct 289772 ACATGCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAG 289713 Query 13210 ACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 ||| ||||| | || || || || |||||||| ||||||||||| || || || ||||| Sbjct 289712 ACCAGGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCAAAGGACCCAGAGAAAAA 289653 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCT- 13328 ||||||||| || || ||||| || | | | ||| || | || | | || ||| Sbjct 289652 TATTCCTTCTACAGCGGCAAAAGCAACAAGTCGTTCCGCAAAGGT-GGACTGTTGGTCTG 289594 Query 13329 CTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGT 13388 |||||| | ||||||| ||||| | || || || || |||| || |||| Sbjct 289593 ATATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGT 289534 Query 13389 TAAATAAATAAtttttttCCTTACTG--TCTAAAATATAAGTATCTATCAATAAGCTATA 13446 |||| || || ||| | ||| || || || || || || | || || Sbjct 289533 CGAATAGATGTTTCCGTTC--TTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTA 289476 Query 13447 CATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGA 13506 |||| || |||| |||||||||| ||||||||| || || || || | || || | Sbjct 289475 AGTTTCCGAGTGAACATTTTCCATCATTATTTGGAAGCCGTAGAAGCACCGTGCTTCAGC 289416 Query 13507 TACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGC 13566 |||||||| ||| | | |||| ||| | ||| || || || || ||||| ||| Sbjct 289415 TACCTGAATTTCACTGGAGAATCGTTCAAGGAGGTTCTCATTCACAATGCCGTCGGAAGC 289356 Query 13567 AGCaaaaaaaGCAAGTATGTG 13587 |||||| || || || | ||| Sbjct 289355 AGCAAAGAATGCGAGGACGTG 289335 Score = 127 bits (140), Expect = 2e-24 Identities = 366/559 (65%), Gaps = 7/559 (1%) Strand=Plus/Plus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 |||||||| || ||||| || ||||| | || || ||||||||||| || || | Sbjct 287551 CATGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAG 287610 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| || || ||||| || | ||| || || | ||||| || || || || || Sbjct 287611 CCGGGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAG 287670 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCT 13330 || ||||| || || ||||| || | |||| ||| | | ||| || || Sbjct 287671 ATGCCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCAGAG 287730 Query 13331 ATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTA 13390 |||||||| ||||| | || || |||||| ||| || |||| || || | | Sbjct 287731 ATCCACTTCAGAGCCCATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATCA 287790 Query 13391 AATAAATAAtttttttC--CTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACA 13448 || | || | || ||| ||| || ||||| ||||| | | ||| Sbjct 287791 AAGAGGTACTCGCGCTCAGCTT--GGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATG 287848 Query 13449 TTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATA 13508 |||| |||||||| ||||||||| || || || ||||| ||||| | ||| || | | Sbjct 287849 TTTCGGAATGAATGTTTTCCATCATGATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTG 287908 Query 13509 CCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 |||| ||||| | | || | || | | ||||||||| || || || || ||||| Sbjct 287909 CCTGGACTTCATTGGAGAAGCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAGCAG 287968 Query 13569 CaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTC--TGACAACTTTA-ACC 13625 |||||||||| | | |||| ||||| | || || || ||| || | || Sbjct 287969 CAAAAAAAGCCAAAACGTGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATTCC 288028 Query 13626 AATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685 |||| || || || || | ||| | ||||||| | ||||| || || || | |||| Sbjct 288029 AATCGTAAAGGTCCTTGGAAAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTTCTGCCT 288088 Query 13686 TCTTATACATCATCCATAT 13704 | || ||||| |||||| Sbjct 288089 TTTTGTACATTTGCCATAT 288107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430970135183670