Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq666 143 6e-29 seq641 141 2e-28 seq120 140 7e-28 >seq666 Length=522490 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | |||||||| ||||||||||| || ||||| || || | ||| ||||| || Sbjct 282820 AGATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGC 282879 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 |||||||| || || || | | || || ||||| || || ||||| ||||| || ||| Sbjct 282880 TGTTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATC 282939 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || | ||| ||||| || | ||||||| | || ||||| || || || ||||| ||| Sbjct 282940 TTGGTTTTGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCA 282999 Query 104534 GTAAGTGTTTTTACAAATATCTGCATT 104560 || | || |||||||| ||||||||| Sbjct 283000 GTCAAGGTCTTTACAAAAATCTGCATT 283026 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||||||||| ||||| || ||||| | ||| ||||| ||||| || || Sbjct 282551 GTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGTTGCTTGCCG 282610 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | || ||||| |||||||| ||||| || ||||||||||| || || Sbjct 282611 GCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAATCTTGGCCTTG 282670 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||| | ||| ||||| || || || ||||| || || || || Sbjct 282671 ACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCTGTCAGAGTC 282730 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 282731 TTGACAAAAATTTGCAT 282747 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || |||||||| || || || || |||||||| ||||| || || ||||| Sbjct 282049 TCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGAGTTGCTTGCCCGCAAAG 282108 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 ||||| | || || ||||| || || ||||| || ||||||||||| ||||| || || Sbjct 282109 ATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCTGAATCTTCGCTTTCACGTTG 282168 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | || || || | ||||| ||||| || || || || || ||| Sbjct 282169 TCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTCCGGTGAGCGTCTTCACA 282228 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 282229 AAAATCTGCAT 282239 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || ||||||||||| || || ||||| ||||| | ||||| Sbjct 282256 AGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCC 282315 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || ||||| || ||||| || | | || || || || || || ||||| || ||| Sbjct 282316 TCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGGATGCCTTCCTTGTCC 282375 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||| || || || || || || | || || | ||| ||||| || ||||| ||| Sbjct 282376 TGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACCTCGAGCGTAATGGTC 282435 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | || || || || || ||||| Sbjct 282436 TTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 >seq641 Length=242067 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || ||||||||||| || || ||||| || ||||| | || || Sbjct 74073 AAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATC 74014 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || |||||||| || || || || || | |||||||||||||| || || |||||||| Sbjct 74013 CTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATC 73954 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| || || || || || || || | |||||| | || ||||| || || ||||| Sbjct 73953 CTGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGT 73894 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| || || || || || |||||||| Sbjct 73893 CTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | ||| ||||| ||||| |||||||| || || || |||| || || || ||| Sbjct 74294 AGATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGT 74235 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || ||||| || || || | |||||||||||||| || || || || || |||||| Sbjct 74234 TGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATC 74175 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || || || || || || | || || || ||| || || || || |||||||| || Sbjct 74174 TTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCC 74115 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || | || || ||||| |||||||| Sbjct 74114 GTCAAAGTCTTGACAAAGATCTGCAT 74089 Score = 100 bits (110), Expect = 7e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | ||| || ||||| | || ||||| ||||| |||||||| ||| Sbjct 73862 ATACCACCGCGTAGACGAAGGACGAGATGGAGGGTCGATTCCTTCTGTATATTATAATCA 73803 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || |||| |||||| || || ||||||||||| || || || | |||||| |||||| Sbjct 73802 GAAAGTGTTCGACCGTCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGA 73743 Query 104450 GGTAT 104454 || || Sbjct 73742 GGGAT 73738 >seq120 Length=370717 Score = 140 bits (154), Expect = 7e-28 Identities = 301/447 (67%), Gaps = 5/447 (1%) Strand=Plus/Minus Query 268841 TTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTA 268900 ||||| || | || | || |||||||| | | ||||| || || |||||||| || Sbjct 287996 TTTATCTCGCACGTTTTGGCTTTTTTTGCTGCTTCCGATGGCATTGTCAACGAAAACCTT 287937 Query 268901 GTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAG 268960 || ||| |||| | || || ||| ||||||| | ||||| || || || ||| Sbjct 287936 GTCGAGCGCTTCTCCAATGAAGTCCAGGCAGCTGAAGCTCGCTGTTTCTATGGCTTTCAG 287877 Query 268961 ATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGAT 269020 || || ||||| |||||||| || | || ||| | ||||| ||||| || | Sbjct 287876 ATCATGATGGAAAACATTCATTCCGAAACATATTCTCTCCTTATAGACACTTACATCAAG 287817 Query 269021 GATAACAACGAAAAGAAAAGAC-TATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaa 269079 || | | | | | | || | ||| | | || ||| || |||| | | | Sbjct 287816 GACCA-AGCTGAGCGCGAGTACCTCTTTGATGCCATCGAAACCATTCCCTGTATTAAACG 287758 Query 269080 aaaaTCTGAATGGGCTCTGAAATGGAT---AAACGATAGCGCGCCTTACGGAGAAAGGTT 269136 || |||||||||||||||| ||||| || | | | | ||| || ||| |||| Sbjct 287757 GAAGGCTGAATGGGCTCTGAAGTGGATCTCTGACAAGAACTCTACTTTCGCCGAACGGTT 287698 Query 269137 AGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTG 269196 |||||| ||||| ||||| ||||| || ||||| || || || ||||| | ||||| || Sbjct 287697 AGTTGCATTTGCGGCTGTGGAAGGCATCTTCTTCTCAGGCTCCTTTGCATCAATCTTCTG 287638 Query 269197 GTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGA 269256 | | |||||| | || || ||||| || || |||||||| ||||| | || ||| | || Sbjct 287637 GCTAAAGAAACGTGGTCTCATGCCCGGCTTGACTTTCTCAAACGAGCTTATCAGCCGTGA 287578 Query 269257 CGAAGGTTTACACTGCGACTTCGCTTG 269283 || ||| | ||| |||||| || || Sbjct 287577 TGAGGGTATGCACACCGACTTTGCATG 287551 Score = 129 bits (142), Expect = 1e-24 Identities = 373/571 (65%), Gaps = 10/571 (2%) Strand=Plus/Plus Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792 ||||||| | || ||| |||| || || |||||||| | ||| ||| ||||||| Sbjct 289215 ATATGGAATTTTTATAAAAAGGCACAGGCGTCATTTTGGACCGCAGAGGAAATAGATCTC 289274 Query 268793 TCTTATGACTTAATAGATTGGAAAAAT----TTAAAACCAGAAGAAAGAAGATTTATATC 268848 | | || | || |||||||| || | || |||| ||| | || || || Sbjct 289275 TGCCACGATCTCATGGATTGGAATCATAAGCTCAACTCCAGC-GAACGGTATTTCATCTC 289333 Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908 | | | || || || ||||| | | || || || || || || || || | || Sbjct 289334 TCACGTCCTCGCATTCTTTGCTGCTTCCGACGGCATTGTGAATGAGAACCTCCTTGAACG 289393 Query 268909 GTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968 |||| || | ||| | ||||||| | || || ||||| ||||| ||| || Sbjct 289394 ATTCTCCAGTGAAATTCAGGTAGCTGAAGCACGGTGCTTCTACGGCTTCCAAATAATGAT 289453 Query 268969 AGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAA 269028 |||||| |||| || || | ||| |||| | || || || || || | ||| | Sbjct 289454 GGAAAATGTTCACTCGGAAACTTACTCTCTACTTATCGACACCTACATCAAGGATCCAGA 289513 Query 269029 CGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGA 269088 ||| |||| ||||| | || ||| || ||||| | ||| |||| Sbjct 289514 AGAACGGAAACATCTATTCGACGCCATCGAAACCATCTCATGTGTCAAGCGTAAAGCTGA 289573 Query 269089 ATGGGCTCTGAAATGGATA----AACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTT 269144 |||||||| | ||||||| | | | || | |||| | ||| | | ||||||| Sbjct 289574 CTGGGCTCTTAGATGGATATCAGACCAACAGTCCACCTTTGCG-GAACGACTTGTTGCTT 289632 Query 269145 TTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGA 269204 |||||||||||||||| ||||| || || ||||| ||||| ||||| |||||| | |||| Sbjct 289633 TTGCCGCTGTAGAAGGAATATTTTTCTCTGGGTCCTTTGCTGCTATTTTTTGGATCAAGA 289692 Query 269205 AAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTT 269264 | | || | ||||| || | |||||||| || ||| | || || | |||||||| Sbjct 289693 AGCGTGGTTTGATGCCTGGTCTCACTTTCTCCAATGAACTCATCAGTCGCGACGAAGGCC 289752 Query 269265 TACACTGCGACTTCGCTTGTTTATTATTTAC 269295 | ||| || || || ||| ||||||| || Sbjct 289753 TTCACACGGATTTTGCATGTCTATTATTCAC 289783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151363953398180