Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq458 91.5 8e-14 seq467 87.8 9e-13 seq300 87.8 9e-13 >seq458 Length=497640 Score = 91.5 bits (100), Expect = 8e-14 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 11447 AAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||||| |||||||| | | |||||||||| |||||||||||||||||||| |||| Sbjct 404779 AAATCACAATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACAACGC 404720 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||||||||| | |||| Sbjct 404719 TCTAACCAACTGAGCTAGTCGGCC 404696 Score = 91.5 bits (100), Expect = 8e-14 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 11447 AAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 |||||| |||||||| | | |||||||||| |||||||||||||||||||| |||| Sbjct 411791 AAATCACAATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACAACGC 411732 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| ||||||||||||| | |||| Sbjct 411731 TCTAACCAACTGAGCTAGTCGGCC 411708 Score = 91.5 bits (100), Expect = 8e-14 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 |||||||| | | |||||||||| |||||||||||||||||||||||||||| ||| Sbjct 417827 AATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACC 417886 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||| | |||| Sbjct 417887 AACTGAGCTAGTCGGCC 417903 >seq467 Length=248921 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 41483 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 41542 Query 11528 CC 11529 || Sbjct 41543 CC 41544 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 63216 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 63275 Query 11528 CC 11529 || Sbjct 63276 CC 63277 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||| || ||||||||||||| | || Sbjct 118271 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCACTAACCAACTGAGCTAGTCGG 118330 Query 11528 CC 11529 || Sbjct 118331 CC 118332 >seq300 Length=468840 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| | || Sbjct 66694 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 66753 Query 11528 CC 11529 || Sbjct 66754 CC 66755 Lambda K H 0.639 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261483758532460