Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08-
10] 2,335 sequences; 67,296,805 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq458 91.5 8e-14
seq467 87.8 9e-13
seq300 87.8 9e-13
>seq458
Length=497640
Score = 91.5 bits (100), Expect = 8e-14
Identities = 71/84 (85%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 11447 AAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505
|||||| |||||||| | | |||||||||| |||||||||||||||||||| ||||
Sbjct 404779 AAATCACAATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACAACGC 404720
Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529
||| ||||||||||||| | ||||
Sbjct 404719 TCTAACCAACTGAGCTAGTCGGCC 404696
Score = 91.5 bits (100), Expect = 8e-14
Identities = 71/84 (85%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 11447 AAATCA-AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505
|||||| |||||||| | | |||||||||| |||||||||||||||||||| ||||
Sbjct 411791 AAATCACAATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACAACGC 411732
Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529
||| ||||||||||||| | ||||
Sbjct 411731 TCTAACCAACTGAGCTAGTCGGCC 411708
Score = 91.5 bits (100), Expect = 8e-14
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512
|||||||| | | |||||||||| |||||||||||||||||||||||||||| |||
Sbjct 417827 AATTGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACC 417886
Query 11513 AACTGAGCTAATGGGCC 11529
|||||||||| | ||||
Sbjct 417887 AACTGAGCTAGTCGGCC 417903
>seq467
Length=248921
Score = 87.8 bits (96), Expect = 9e-13
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 41483 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 41542
Query 11528 CC 11529
||
Sbjct 41543 CC 41544
Score = 87.8 bits (96), Expect = 9e-13
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 63216 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 63275
Query 11528 CC 11529
||
Sbjct 63276 CC 63277
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||||||||||||||||||||| || ||||||||||||| | ||
Sbjct 118271 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCACTAACCAACTGAGCTAGTCGG 118330
Query 11528 CC 11529
||
Sbjct 118331 CC 118332
>seq300
Length=468840
Score = 87.8 bits (96), Expect = 9e-13
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 66694 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 66753
Query 11528 CC 11529
||
Sbjct 66754 CC 66755
Lambda K H
0.639 0.410 0.922
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261483758532460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |