Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq641 100 3e-16 seq666 96.9 3e-15 >seq641 Length=242067 Score = 100 bits (110), Expect = 3e-16 Identities = 153/215 (71%), Gaps = 5/215 (2%) Strand=Plus/Minus Query 94798 CACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATC 94854 |||| || |||| || |||||||| || | ||||||||| | || ||| | ||| Sbjct 74299 CACCGAGATGCAGTGTCGATTCCTTCTGTATATTATAATCGG--AGAGGGTTCGCCCATC 74242 Query 94855 CTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTC 94914 ||| || || || || | ||||| | | ||| ||||| ||||||||||| || ||||| Sbjct 74241 CTCAAGTTGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTC 74182 Query 94915 ATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT 94974 | ||| || ||||| ||| ||| ||||||| || || |||| || || || Sbjct 74181 TTGAATCTTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGT 74122 Query 94975 TTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || | ||| || |||||||||||||||| Sbjct 74121 CTTGCCCGTCAAAGTCTTGACAAAGATCTGCATGC 74087 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| || || | ||| || ||| | |||| |||||| || ||||| || Sbjct 74057 GTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCCTCGAGTTGTTTGCCT 73998 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | ||| ||||| ||||| ||||| ||||| || | ||||| |||||| Sbjct 73997 GCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCCTGGATTTTAGCCTTG 73938 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| || || | ||||| |||| ||||| || || ||||| ||||| Sbjct 73937 ACGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGTCTTGCCAGTCAGAGTC 73878 Query 94991 TTCACAAAGATCTGCAT 95007 || || ||||||||||| Sbjct 73877 TTGACGAAGATCTGCAT 73861 >seq666 Length=522490 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 ||||||||||| || | || ||||| | ||||| || ||| || |||||||||| Sbjct 282829 GTAGATTCCTTCTGAATATTGTAATCAG--AAAGTGTACGACCATCTTCGAGCTGTTTTC 282886 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || | ||||| || | |||||| || || ||||||||||| || || | || || | | Sbjct 282887 CGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTTGGTTT 282946 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| | ||| || || | | || || |||| |||||||| || ||||| | | Sbjct 282947 TGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGG 283006 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || ||||| |||||||| Sbjct 283007 TCTTTACAAAAATCTGCAT 283025 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || || || || || ||||||||| | |||||| || || ||||||||||| ||| Sbjct 282085 TCTTCGAGTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTG 282144 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || || || ||| | | | ||||| | || || || | ||| || Sbjct 282145 TCCTGAATCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATC 282204 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || || || |||||||| |||||||| Sbjct 282205 GTCTTTCCGGTGAGCGTCTTCACAAAAATCTGCAT 282239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448278115500600