Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq357 140 5e-29 seq429 100 4e-17 seq67 95.1 2e-15 >seq357 Length=291160 Score = 140 bits (154), Expect = 5e-29 Identities = 119/144 (83%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||||||| ||| |||||| |||||||| || || || || ||||| ||||| Sbjct 71714 GCTAAGCGTCATCGCAAGAT-TCTTCGTGATAACATACAGGGTATTACAAAGCCCGCTAT 71656 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| ||||||||||| || || |||||| ||||||| | | ||||| |||| Sbjct 71655 TCGTCGTCTCGCTCGTCGTGGAGGTGTGAAGCGTATCTCTGGTCTTATTTATGAGGAGAC 71596 Query 16552 TCGTGATGTTTTGAAGATCTTCCT 16575 ||| | |||| ||||||||||||| Sbjct 71595 TCGCGGTGTTCTGAAGATCTTCCT 71572 Score = 136 bits (150), Expect = 6e-28 Identities = 121/149 (81%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||||||| |||| |||||| || ||||| || || || || ||||| ||||| Sbjct 214801 GCCAAGCGTCATCGCAAGAT-TCTTCGTGACAACATTCAGGGTATTACAAAGCCCGCTAT 214859 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| ||||||||||| || || |||||| | ||||| | ||||||| |||| Sbjct 214860 CCGCCGTCTCGCTCGTCGTGGAGGTGTGAAGCGTATTTCTGGCCTCATCTATGAGGAGAC 214919 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGA 16580 ||||| ||||||||| || |||||| ||| Sbjct 214920 TCGTGGTGTTTTGAAAATTTTCCTCGAGA 214948 >seq429 Length=286156 Score = 100 bits (110), Expect = 4e-17 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| ||||| ||||| || ||||| |||||||||||||| || || ||| |||| Sbjct 256917 AGGTATCACGAAGCCTGCTATTCGCCGTCTCGCTCGTCGTGGTGGTGTTAAACGTATCTC 256858 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 |||| | |||| || |||| |||| || ||||||||||| | ||| || || Sbjct 256857 TGGACTCATCTACGAGGAGACCCGTGGAGTGTTGAAGATCTTTTTGGAGAATGTCATTAG 256798 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 ||| || | |||||| || || |||||||| Sbjct 256797 GGATTCTGTTACCTATACTGAACATGCTAAACG 256765 >seq67 Length=543580 Score = 95.1 bits (104), Expect = 2e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 ||||| ||||| || || ||||||||||| ||||||||| | || || | |||||||| Sbjct 450080 GCTATTCGTCGCCTCGCCCGTCGTGGTGGCGTCAAGCGTATTTCCGGCCTCATCTATGAA 450021 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| || | |||| | || |||||||| ||| ||||| | ||| || || ||| Sbjct 450020 GAGACACGCGGTGTTCTCAAAATCTTCCTGGAGAATGTTATTCGTGACTCTGTCACTTAT 449961 Query 16607 ACCGAGCACGCTAAACG 16623 || || || |||||||| Sbjct 449960 ACTGAACATGCTAAACG 449944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073065093155