Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq641 84.2 2e-11 seq120 84.2 2e-11 >seq641 Length=242067 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || || | || ||| | ||||| || | Sbjct 74089 ATGCAGATCTTTGTCAAGACTTTGACGGGCAAGACTATAACCCTTGAAGTTGAATCTTCT 74148 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| ||||| || || || ||||| |||||| Sbjct 74149 GACACGATCGATAACGTTAAGGCGAAGATTCAAGACAAGGAGGGTATTCCTCCTGATCAA 74208 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | || ||||||||||| || |||| ||| | || ||||||||| Sbjct 74209 CAACGTCTTATCTTCGCTGGCAAGCAACTTGAGGATGGGCGAACCCTCTCCGATTATAAT 74268 Query 24171 ATTCAAAAAGAATCTACAATTCAT 24194 || || || ||||| ||| | ||| Sbjct 74269 ATACAGAAGGAATCGACACTGCAT 74292 >seq120 Length=370717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/162 (73%), Gaps = 8/162 (5%) Strand=Plus/Minus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 || || |||||||| || || ||||| || | || |||||| ||| |||||| ||||| Sbjct 290103 ACCCGCTTTTCAAAGAAGTTGGTCTTTCCTTGCATAGAAATCATATCCATAAAATCGAAG 290044 Query 104662 GGATT---CAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCC 104718 || || | || | ||||||| |||| || || ||| | |||||||| || Sbjct 290043 GGGTTTTGCGAACCGT---AATATTTATCGTTTCCCAGAGCGACAAGAAGTCGATCTGCG 289987 Query 104719 ACAAATTCGATGTACTCGCACATAGAATGT-GCATTCATGCC 104759 |||||||| || |||| |||||| || | | ||||||||||| Sbjct 289986 ACAAATTCAATATACTGGCACAT-GAGTATAGCATTCATGCC 289946 Score = 82.4 bits (90), Expect = 7e-11 Identities = 177/257 (69%), Gaps = 17/257 (7%) Strand=Plus/Plus Query 104884 AGGCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGTAAGTC 104943 ||||| |||||||| ||||||| || ||||| | ||||| ||||| | ||||| Sbjct 287548 AGGCATGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTC 287607 Query 104944 AAGCCAGGTA-GAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAACTACC 105002 ||||| || | ||| || ||| ||||| || |||| | ||||| || Sbjct 287608 AAGCCGGGCATGAGACCACGTTT------CTTTAGCC-AGAAGATTGATGCAAAGGAGCC 287660 Query 105003 GGAGAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAATGTAGCAGT 105062 ||||| |||| ||||| || ||||| || || | ||||||||||| |||| ||| Sbjct 287661 TGAGAAGAAGATGCCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTAG-AGT 287719 Query 105063 TTGACTT-TCA---ATCCATTTCTGAGCCCATGTTGCCTTCCGTTTGACGCTATCAATGT 105118 | ||| ||| ||||| ||| |||||||| ||||||||||| | | |||| Sbjct 287720 T---CTTGTCAGAGATCCACTTCAGAGCCCATTCAGCCTTCCGTTTAATACAGGGAATGG 287776 Query 105119 GCTCGATGGCATTCAAA 105135 ||||||||| ||||| Sbjct 287777 TTTCGATGGCA-TCAAA 287792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429923764961925