Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq666 116 3e-21 seq458 104 2e-17 seq120 82.4 7e-11 >seq666 Length=522490 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | |||||| || | ||| | |||||||| || |||||||||||||| Sbjct 282241 CCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAA 282300 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||| || || || |||| || || |||||||| || ||| Sbjct 282301 AGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGG 282360 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| ||||| | || | || || | || || | Sbjct 282361 ATGCCTTCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACC 282420 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || | || || |||||||| ||||| Sbjct 282421 TCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131031 ATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTG 131090 ||| | ||| || ||||| ||||| |||||||| | || || || || ||||| Sbjct 282822 ATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTG 282881 Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 || || ||| |||| ||||| |||||||| || || || ||||| || || ||| || Sbjct 282882 TTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTT 282941 Query 131151 CTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 |||| | || | ||||||| |||||| | || | ||| | ||| || || || Sbjct 282942 GGTTTTGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGT 283001 Query 131211 TAGAGTTTTTACGAAAATCTGCAT 131234 | || ||||| ||||||||||| Sbjct 283002 CAAGGTCTTTACAAAAATCTGCAT 283025 >seq458 Length=497640 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | || ||||||||||| |||||||||||||| Sbjct 147985 CCACCACGGAGACGAAGGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGCTA 148044 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||||| |||||| Sbjct 148045 AGGGTGCGACCATCCTCAAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGAGGG 148104 Query 131128 AT 131129 || Sbjct 148105 AT 148106 >seq120 Length=370717 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 46108 GACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCC 46167 || ||||| ||||||||||| || | | | ||||||||||| || | || || Sbjct 287750 GAATGGGCTCTGAAGTGGATCTCTGACAAGAACTCTACTTTCGCCGAACGGTTAGTTGCA 287691 Query 46168 TTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA- 46226 |||||| |||||| ||| |||| || || ||| ||||| | ||||| | | || Sbjct 287690 TTTGCGGCTGTGGAAGGCATCTTCTTCTCAGGCTCCTTTGCATCAATCTTCTGGCTAAAG 287631 Query 46227 AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGG 46286 || | || | ||||||||||| |||| || |||||||| || || || ||||| Sbjct 287630 AAACGTGGTC-TCATGCCCGGCTTGACTTTCTCAAACGAGCTTATCAGCCGTGATGAGGG 287572 Query 46287 CCTGCATACGGACTTTGCGTGTCT 46310 |||| || |||||||| || || Sbjct 287571 TATGCACACCGACTTTGCATGCCT 287548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471999023126400