Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq553 129 4e-25 seq666 114 9e-21 seq1466 107 1e-18 >seq553 Length=112798 Score = 129 bits (142), Expect = 4e-25 Identities = 187/263 (71%), Gaps = 6/263 (2%) Strand=Plus/Plus Query 6234 AAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCT 6293 ||| | |||||||| || || || || || ||||||||| ||||||| | || ||||| Sbjct 22395 AAGATTGAGGGTAAAGGGAATGGCATCAAGACCGTCATTCCCAACATGTCCGATGTCGCC 22454 Query 6294 AAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCT 6353 | ||| ||| | |||||| | || || | || || | ||||| ||||||||||| ||| Sbjct 22455 AGGGCCCTCAGTCGCCCTCCGACATATACTACCAAGTTCTTCGGTTGCGAACTTGGAGCT 22514 Query 6354 CAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCC 6413 ||||| || || | |||||||| |||| || || ||||| | || || ||| Sbjct 22515 CAGACATCATTCGACGAGAAAAACGATCGCTATATTGTGAACGGTGCCCACAA---TGCG 22571 Query 6414 AAG---CTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGC 6470 || || | || ||||||||||||||||| ||| || || || || | ||| Sbjct 22572 GAGCGTCTTCGTGAATTACTTGACGGCTTTATCGACAAATTCGTTCTCTGCAAGTCGTGC 22631 Query 6471 GATAACCCGGAGACCGAGCTTAT 6493 | ||||||||||| ||||| || Sbjct 22632 AAGAACCCGGAGACTGAGCTCAT 22654 >seq666 Length=522490 Score = 114 bits (126), Expect = 9e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| || | ||| || || ||| || ||||| |||||||||| Sbjct 282239 TACCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAG 282298 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || |||| || | ||||| |||||||| || | |||||| || |||| || Sbjct 282299 AAAGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGG 282358 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCA 38267 ||| |||||| |||||| |||||| ||| || || | | || || | || |||| Sbjct 282359 GGATGCCTTCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTC-CGACGATTCA 282417 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || | ||||| || || |||||||| || || ||||| || ||||| Sbjct 282418 ACCTCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 >seq1466 Length=295 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 61 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 120 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 121 GCCAATATTTAGCTTTA 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334937668135385