Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq120 181 1e-40 >seq120 Length=370717 Score = 181 bits (200), Expect = 1e-40 Identities = 379/559 (68%), Gaps = 8/559 (1%) Strand=Plus/Minus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 |||||| ||||| ||| || || ||||| | ||| || | ||| ||||| || ||||| Sbjct 289772 ACATGCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAG 289713 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| | |||||||| || | |||||| || | ||||| || ||||| || || Sbjct 289712 ACCAGGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCAAAGGACCCAGAGAAAAA 289653 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG-CGCT--GTCATG 32836 ||||||||||| || ||||| |||| ||||| || || | || | | ||| Sbjct 289652 TATTCCTTCTACAGCGGCAAAAGCAACAAGTCGTTCCGCAAAGGTGGACTGTTGGTCTGA 289593 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 |||||| | ||||||| || || || || ||||| | || || || || || | Sbjct 289592 TATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGTC 289533 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 || |||| || ||| | ||| || | || || || || | ||| || | Sbjct 289532 GAATAGATGTTTCCGTTCTTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTAAGT 289473 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 |||||| |||| ||||| || ||||| || ||||||||||| | || || | | Sbjct 289472 TTCCGAGTGAACATTTTCCATCATTATTTGGAAGCCGTAGAAGCACCGTGCTTCAGCTAC 289413 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 ||| | ||| | | |||||||| | || |||||||| || ||||| || || Sbjct 289412 CTGAATTTCACTGGAGAATCGTTCAAGGAGGTTCTCATTCACAATGCCGTCGGAAGCAGC 289353 Query 33077 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTT---ATTCC 33132 ||| || || | || || || ||||| |||| |||| ||| || || ||||| Sbjct 289352 AAAGAATGCGAGGACGTGAGAGATGAAATACCGTTCG-CTGGAGTTGAGCTTATGATTCC 289294 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 |||| ||| ||| | | | ||| | ||| || | ||||||||||| |||| ||||| Sbjct 289293 AATCCATGAGATCGTGGCAGAGATCTATTTCCTCTGCGGTCCAAAATGACGCCTGTGCCT 289234 Query 33193 TTTTATACATATTCCAGAT 33211 ||||||| | |||||| || Sbjct 289233 TTTTATAAAAATTCCATAT 289215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633613505866000