Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq666 122 8e-23 seq641 105 6e-18 >seq666 Length=522490 Score = 122 bits (134), Expect = 8e-23 Identities = 153/205 (75%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| |||| || || ||||||| | || || || ||||| Sbjct 282747 ATGCAAATTTTTGTCAAGACTCTGACAGGAAAGACCATCACTCTTGAGGTTGAATCGTCC 282688 Query 25059 GACACTATCGAGTCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || | || | ||| | || | ||| ||||| ||||| || || || || | Sbjct 282687 GACACTATTGA-TAACGTCAAGGCCAAGATTCAG-GACAAGGAAGGTATACCTCCCGATC 282630 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || || | || || |||||||| ||| | ||||||| ||||||| | || |||| Sbjct 282629 AGCAACGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGTCGCACTCTCTCGGACTACA 282570 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 ||||||| || |||||||| || || Sbjct 282569 ATATTCAGAAGGAATCCACCCTCCA 282545 Score = 116 bits (128), Expect = 3e-21 Identities = 151/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||||||||| ||||| || || ||||||| | || |||||||| || Sbjct 283026 AATGCAGATTTTTGTAAAGACCTTGACTGGGAAGACCATCACCCTTGAGGTGGAGTCCTC 282967 Query 25058 TGACACTATCGAGTCACTGAAGCAA--AAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || ||||| || || || || ||| || || ||||| ||||| |||||| Sbjct 282966 CGATACCATCGA--CAATGTCAAAACCAAGATCCAAGATAAGGAAGGTATTCCCCCTGAC 282909 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | || || ||||| ||||| | ||||||| ||| || | |||||| Sbjct 282908 CAGCAACGTTTGATCTTCGCCGGAAAACAGCTCGAAGATGGTCGTACACTTTCTGATTAC 282849 Query 25176 AATATTCAAAAAGAATCCACGCTACAT 25202 |||||||| || ||||| || || ||| Sbjct 282848 AATATTCAGAAGGAATCTACCCTTCAT 282822 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || | || || | |||||||||||||| Sbjct 282239 ATGCAGATTTTTGTGAAGACGCTCACCGGAAAGACGATTACGTTGGAAGTGGAGTCGTCG 282180 Query 25059 GACACTATCGAGTCACTG-AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || || |||| || | ||| ||||| ||||| ||||| |||||||| Sbjct 282179 GACACGATTGACAACGTGAAAGCGAAGATTCA-GGACAAGGAAGGTATTCCGCCTGACCA 282121 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGA 25153 || || | || ||||| ||||| ||| | ||||| Sbjct 282120 GCAACGCCTAATCTTTGCGGGCAAGCAACTCGAAGA 282085 >seq641 Length=242067 Score = 105 bits (116), Expect = 6e-18 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || || | || || | ||||| || || ||| Sbjct 74089 ATGCAGATCTTTGTCAAGACTTTGACGGGCAAGACTATAACCCTTGAAGTTGAATCTTCT 74148 Query 25059 GACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | || | | || || | ||| ||||| || || ||||| ||||| | Sbjct 74149 GACACGATCGA-TAACGTTAAGGCGAAGATTCA-AGACAAGGAGGGTATTCCTCCTGATC 74206 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || |||| || || ||||| ||| | || |||| || || | |||||| | Sbjct 74207 AACAACGTCTTATCTTCGCTGGCAAGCAACTTGAGGATGGGCGAACCCTCTCCGATTATA 74266 Query 25177 ATATTCAAAAAGAATCCACGCTACAT 25202 |||| || || ||||| || || ||| Sbjct 74267 ATATACAGAAGGAATCGACACTGCAT 74292 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| |||| || || | ||||| | || || ||||| || Sbjct 73861 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCATCA 73920 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| |||||| || ||||| || || || ||||| ||| Sbjct 73921 GATACCATCGACAACGTCAAGGCTAAAATCCAGGATAAAGAGGGTATCCCTCCTGATCAA 73980 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || || ||||||||| | || |||| |||||| | ||| ||||| Sbjct 73981 CAACGTCTCATCTTCGCAGGCAAACAACTCGAGGATGGACGCACTCTCTCCGACTACAAC 74040 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | || || Sbjct 74041 ATCCAGAAAGAATCCACCCTTCATCTCGTCCT 74072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433315668433025