Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq120 250 3e-61 >seq120 Length=370717 Score = 250 bits (276), Expect = 3e-61 Identities = 393/560 (70%), Gaps = 7/560 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCG--TGATATCAACTCATTGCTGAATGTT 93148 ||| ||||||||||| || | ||| || || || ||||| | ||| || ||| || Sbjct 287550 GCATGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATA--AGCTCGTTTGAGAAAGTC 287607 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 || || || | || || |||||||| ||||| || ||||| ||||| || || || Sbjct 287608 AAGCCGGGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAG 287667 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 || || |||||||| || |||||||| || | |||||||| ||| | | | || Sbjct 287668 AAGATGCCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCA 287727 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 |||||| || | |||||| || || || |||||||| || | |||||||| || Sbjct 287728 GAGATCCACTTCAGAGCCCATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCA 287787 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | ||| ||||| || ||||| | || ||||| || || || | |||||||| Sbjct 287788 TCAAAGAGGTACTCGCGCTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATAT 287847 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 |||| ||||| | || ||||| || || || || |||||||| | |||||| | Sbjct 287848 GTTTCGGAATGAATGTTTTCCATCATGATCTGAAAGCCATAGAAACAGCGAGCTTCAGCT 287907 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 ||| ||||| | || || | ||| || || ||||| ||||| || |||||||| || Sbjct 287908 GCCTGGACTTCATTGGAGAAGCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAGCA 287967 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCC 93565 |||||||||||||| | ||| ||||| || ||||| || || | | | || | Sbjct 287968 GCAAAAAAAGCCAAAACGTGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATTC 288027 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 |||||| | || || || |||||||| | || || | ||||| || ||||||||||| Sbjct 288028 CAATCGTAAAGGTCCTTGGAAAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTTCTGCC 288087 Query 93626 TTTTTGTACATATCCCATAT 93645 ||||||||||| | |||||| Sbjct 288088 TTTTTGTACATTTGCCATAT 288107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556844546625400