Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq641 131 1e-25 seq666 123 2e-23 >seq641 Length=242067 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| ||||| || || | | Sbjct 73861 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCATCA 73920 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| ||||| || || || |||||||| || || |||||| Sbjct 73921 GATACCATCGACAACGTCAAGGCTAAAATCCAGGATAAAGAGGGTATCCCTCCTGATCAA 73980 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || || |||||||| | |||||| ||||| ||||||| |||||| Sbjct 73981 CAACGTCTCATCTTCGCAGGCAAACAACTCGAGGATGGACGCACTCTCTCCGACTACAAC 74040 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || |||||||||||| | ||| | || | || | || ||||| Sbjct 74041 ATCCAGAAAGAATCCACCCTTCATCTCGTCCTTCGCCTCCGTGGAGG 74087 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||||| || || || || | || |||||||| ||| | | Sbjct 74089 ATGCAGATCTTTGTCAAGACTTTGACGGGCAAGACTATAACCCTTGAAGTTGAATCTTCT 74148 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | | || || ||||||||||||||||||||||| || |||||| Sbjct 74149 GACACGATCGATAACGTTAAGGCGAAGATTCAAGACAAGGAGGGTATTCCTCCTGATCAA 74208 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| || || ||||| || | |||||| || ||| |||||||||| || Sbjct 74209 CAACGTCTTATCTTCGCTGGCAAGCAACTTGAGGATGGGCGAACCCTCTCCGATTATAAT 74268 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 74269 ATACAGAAGGAATCGAC 74285 >seq666 Length=522490 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||| || ||| | || || || || |||||||||| || ||| | || Sbjct 282747 ATGCAAATTTTTGTCAAGACTCTGACAGGAAAGACCATCACTCTTGAGGTTGAATCGTCC 282688 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || ||||| |||||||| ||||| || |||||||| Sbjct 282687 GACACTATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATACCTCCCGATCAG 282628 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || |||||||| || | || ||| ||||| |||| || ||||| Sbjct 282627 CAACGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGTCGCACTCTCTCGGACTACAAT 282568 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || ||||||||| Sbjct 282567 ATTCAGAAGGAATCCACC 282550 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || || || || || || | || || || || ||| | | Sbjct 282467 ATGCAAATTTTCGTCAAGACGTTGACGGGGAAGACCATTACGCTCGAGGTTGAATCGTCG 282408 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| |||||||| |||||||| || || || ||||| || Sbjct 282407 GACACAATTGATAACGTCAAGGCGAAAATTCAGGACAAGGAAGGCATCCCCCCCGACCAG 282348 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || |||||||| |||||| | ||||| |||||| | || ||||||||| Sbjct 282347 CAACGCTTGATCTTTGCCGGGAAACAGCTTGAGGACGGCCGCACTCTTTCTGATTACAAC 282288 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||| || || | ||| | ||| |||| | ||||| ||| Sbjct 282287 ATTCAGAAAGAGTCGACGCTCCATCTTGTTCTGCGTCTCCGCGGTGGT 282240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419716055459275