Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq120 132 1e-25 seq119 95.1 2e-14 seq654 84.2 4e-11 >seq120 Length=370717 Score = 132 bits (146), Expect = 1e-25 Identities = 353/536 (66%), Gaps = 5/536 (1%) Strand=Plus/Plus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| |||||| || || ||||| | |||||| || | | || ||| ||||| | || Sbjct 287565 GTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCGGGCATGAGACC 287624 Query 251904 ACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACA 251963 ||| ||| | ||||||||||||| |||||| || ||||| | | || || ||| Sbjct 287625 ACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAGATGCCTTCCACAGC 287684 Query 251964 CACCCATGCAACAAGGCGCTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGC 252020 | | ||||||| | || || || || || || | | || | ||||| | || Sbjct 287685 CGCAAATGCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCAGAGATCCACTTCAGAGC 287744 Query 252021 CCATGCTGCCTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCG 252080 |||| | |||||| | || ||| || |||||||| ||||||||||| | | || Sbjct 287745 CCATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATCAAAGAGGTACTCGCG 287804 Query 252081 CTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGA 252140 ||| || | ||||| |||| | || | |||||||| || | || ||||| ||| Sbjct 287805 CTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGTTTCGGAATGAATGTT 287864 Query 252141 TTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGA 252200 ||| | | ||||| | ||||||| || || || | |||||| |||| Sbjct 287865 TTCCATCATGATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTGCCTGGACTTCATTGGA 287924 Query 252201 AAAGTTGTTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGC-AAAGAAGCCAAGAA 252259 ||| | ||| ||| || | || ||||||||| | || ||| ||||||| || Sbjct 287925 GAAGCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAGCAGCAAAAAAAGCCAA-AA 287983 Query 252260 TGGTCTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCT 252319 | | ||| ||||| ||||||| ||| ||||| ||| ||| ||| || ||||| Sbjct 287984 CGTGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCATTCCAATCGTAAAGGTCCT 288043 Query 252320 GATTCAGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATT 252375 ||| | || || |||||||||| | | | ||||| ||||||||| Sbjct 288044 TGGAAAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTTCTGCCTTTTTGTACATT 288099 >seq119 Length=129139 Score = 95.1 bits (104), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 279706 TGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATG 279765 |||| |||||||||||||||||||| || ||| |||||||||| || | ||||| Sbjct 14651 TGTCTGGTGGTTGGAAGATGAAGCTCGCTCTCGCTCGCGCCATGCTCTTCAAGGCCGACA 14592 Query 279766 TCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGT 279825 |||| || ||||||||||| || ||||| | || || |||||| |||||| | | | Sbjct 14591 TCCTTCTTCTTGATGAGCCGACTAACCATCTTGATGTCATCAACGTCGCCTGGTTGGAGA 14532 Query 279826 CCTACCT 279832 |||||| Sbjct 14531 ACTACCT 14525 Score = 91.5 bits (100), Expect = 3e-13 Identities = 144/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || || || ||| | || ||||||||||| | || | || | || || | ||||| Sbjct 14071 GGTCCTAACGGTTCCGGCAAGTCTACCCTCGTGAAGTTGCTCATCGGTGACATGGAGGCC 14012 Query 280239 ACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | |||| || | | |||||||| |||||| || || | ||||||||||||||| Sbjct 14011 AACAAGGGTGGTGAGATCTGGAAGCACCCCAACTTGGTTATCGGCTACGTCGCTCAGCAC 13952 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 |||||||||||||| || ||||| || |||| ||| || | | ||||| | ||||| Sbjct 13951 GCTTTCCACCACATTGATAACCATCTCGACAAGACGCCGCTCGAGTACATGCTCTGGCGT 13892 Query 280356 TATGCAAGTGGGCAGGATCTGGAG 280379 || | ||| ||||||| ||| Sbjct 13891 TACCAGACTGGTGAGGATCTTGAG 13868 >seq654 Length=437428 Score = 84.2 bits (92), Expect = 4e-11 Identities = 129/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 293032 GTTTTAAGACCCTTCTTCCATGCGTAGAACAGCATAGATGTCA--TAGACTTCAGTGTGG 293089 || || |||||||||||||| | ||||| |||| ||||| | | | ||| || Sbjct 46526 GTCTTGAGACCCTTCTTCCAGCCATAGAAGTGCATGCTTGTCAGCTGGCCGAGAGTCGGG 46585 Query 293090 GAGTGGCCAGGAAAAGGTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCAG 293149 | || || | | ||||| || || |||| || |||||| ||||||||||||| Sbjct 46586 GCTTG--CAAGTGGACGTTCAAACTTTGGCTCTGGCAGATAAAGGCCCCACGATCAGCAG 46643 Query 293150 CGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGACAT 293209 ||||||| || ||| ||||| ||||||||| |||||||| | ||||||||| | Sbjct 46644 CGAGGTCGATAACTTTCTTCTGGCTGATCTCCCAGACAGTCTTGTAGATTGCCTTGACGT 46703 Query 293210 CA 293211 || Sbjct 46704 CA 46705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027806050013735