Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq448 197 3e-45 seq641 154 3e-32 seq666 152 9e-32 seq120 100 5e-16 seq65 98.7 2e-15 >seq448 Length=220889 Score = 197 bits (218), Expect = 3e-45 Identities = 314/443 (71%), Gaps = 8/443 (2%) Strand=Plus/Plus Query 268286 TGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGC 268345 || |||||||| ||| || || | |||||||||| ||| |||| ||| || |||||| Sbjct 156923 TGTCCCCAATCACGCCGAGCATCAAGGTTCCCGAGGTACAAGCATGACTGTTTCCCGAGC 156982 Query 268346 TTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCG-CCACGTAGAGG 268404 | |||| | || | || || || || ||||| || ||| ||||| |||| Sbjct 156983 GAGATATCTGCAGCTGCACGCGATATCTTGCGCGTTACGAATGT-TCGACCACGACGAGG 157041 Query 268405 GCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTT 268464 ||||||||||||||| ||||| || |||||||| |||| ||||| | ||| || ||||| Sbjct 157042 GCTCTCGTGGTTGAATAGGATCCCATTGCACGCATACATTCCATACGACTCGCGATAGTT 157101 Query 268465 CACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGG 268524 ||||| ||||| |||| | | ||| || |||||||||| || || | ||||| Sbjct 157102 GACGACGATCCAGAATGCGTAGAGCTTGGCGCAGCCGTACGGAGAGCGAGGGTAAAAGGG 157161 Query 268525 CGTCGTGATCTTTTGAGGGATTTCTCG--GACTTTGCCAAAGAGCTCGGAGGTCGATGCT 268582 ||||| |||| || | ||||| ||| || || |||| ||||| || || || Sbjct 157162 TGTCGTCTCGCTTTGCGG--TGTCTCGACGACCTTTCCGTAGAGTTCGGATGTTGACGCC 157219 Query 268583 TGGTAGAACTTTGTTGT-TTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAG 268641 |||||||| | ||| ||| ||||| || ||| | || | ||| ||||| | |||||| Sbjct 157220 TGGTAGAA-GCGGATGTATTTCTCGAGCCCACAGGTGCGTACTGCATCGAGGAGACGAAG 157278 Query 268642 AGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATG 268701 ||| || | ||| || ||||| | || || || | ||| ||||| || || | |||||| Sbjct 157279 AGTACCGAGGCCGTCGACGTCTCCCGTGTATTCTGCCATTTCGAAAGAGACTTTGACATG 157338 Query 268702 GCTCTGGGCGCCCAGGTTATAAA 268724 ||| || || || || |||| Sbjct 157339 TGACTGCGCACCAAGATTGTAAA 157361 >seq641 Length=242067 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || || || || || || |||||||||||||| || | |||||| || | ||| Sbjct 74291 TGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGTTGC 74232 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || ||||| || || | |||||| || || ||||| || ||||||||||||||||| Sbjct 74231 TTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATCTTC 74172 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| ||| ||||| ||||| | ||||| ||||| | ||| || || || ||||| Sbjct 74171 GCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCCGTC 74112 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 | |||||||| || |||||||| Sbjct 74111 AAAGTCTTGACAAAGATCTGCAT 74089 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || ||||| | || | || || ||||| ||||| |||||||| || |||||| Sbjct 74087 CCTCCACGGAGGCGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAG 74028 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | || || || ||||| ||||| | |||||| || || || Sbjct 74027 AGAGTGCGTCCATCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGG 73968 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || || || || || || ||||||||| |||||||| |||| ||| || || Sbjct 73967 ATACCCTCTTTATCCTGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACC 73908 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || || ||||||||||| |||||||| Sbjct 73907 TCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 Score = 107 bits (118), Expect = 4e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || || |||||||| |||||||| ||||| ||| Sbjct 73586 CCACCACGCAGGCGGAGAACTAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAG 73527 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||||||||||||| | ||||||||| || || || || | |||||||||||| ||| Sbjct 73526 AGCGTCCTCCCATCTTCGAGCTGCTTCCCAGCAAAGATAAGGCGTTGTTGGTCGGGAGGA 73467 Query 68355 AT 68356 || Sbjct 73466 AT 73465 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || ||||| || || ||||| ||||| ||| ||||||||||| | ||| || |||||| Sbjct 73691 CCCTCCTTATCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGATGACTCAACTTCC 73632 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| || || || ||||| ||||||||||| || ||||| Sbjct 73631 AAAGTGATCGTCTTCCCTGTGAGTGTCTTGACGAAGATTTGCAT 73588 >seq666 Length=522490 Score = 152 bits (168), Expect = 9e-32 Identities = 161/211 (76%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 |||| || || || ||| ||| || || |||||||| ||||| || |||||||| |||| Sbjct 282029 TACCCAGATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTT 282088 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | | ||||| || || || || || | ||| ||||| || ||||| ||||||||||| | Sbjct 282089 CGAGTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCT 282148 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 ||||||| || || ||| || || ||||| | || || |||||||| || || || | Sbjct 282149 GAATCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCT 282208 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| ||||| || || |||||||| Sbjct 282209 TTCCGGTGAGCGTCTTCACAAAAATCTGCAT 282239 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| || |||| || | || ||||| |||||||| || ||||| ||||| || Sbjct 282241 CCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAA 282300 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||| |||||||| || || | | ||| |||||||| || Sbjct 282301 AGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGG 282360 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| ||||| || ||||||||| || || ||||| | ||||| || Sbjct 282361 ATGCCTTCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACC 282420 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| || ||||| | ||||||||||| || ||||| Sbjct 282421 TCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 147 bits (162), Expect = 4e-30 Identities = 160/211 (76%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 68252 TACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTT 68310 ||||||| || || ||||| || || || || || || || ||||| || | ||||||| Sbjct 282537 TACCAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTT 282596 Query 68311 CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | | ||||| |||||||| || | | ||| || ||||| || || ||||||||||| | Sbjct 282597 CAAGTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCT 282656 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 ||||||| ||||||||| || || ||||| | ||||| || || | |||||||| | Sbjct 282657 GAATCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCT 282716 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || |||||||| || || ||||| Sbjct 282717 TTCCTGTCAGAGTCTTGACAAAAATTTGCAT 282747 >seq120 Length=370717 Score = 100 bits (110), Expect = 5e-16 Identities = 135/185 (73%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 9942 CCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGGGAA 10001 || ||||| ||| ||||| ||||| ||| |||||||| | |||||| | | ||| Sbjct 287198 CCAGCCTTTGAGTAATCCGAAACCCGCTTCTCAAAGAAGTTCGTCTTGCCTTGTAATGAA 287257 Query 10002 ATGAGCTCCATGAAGTCAAAGGGGTT---CTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 || | |||||||||||||| || || || | | | || |||| || |||||| Sbjct 287258 ATCATGTCCATGAAGTCAAATGGATTGGTCTTGTTGT-AGAC--CTTGTCGTTACCGAGG 287314 Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118 || || | || |||||||| ||||| |||||||||| ||| ||||||||||||||| Sbjct 287315 GCCACGAGTAAACGATCAGCCACAAACTCAATGTACTGGCGCATTAGGTCCGAGTTCATG 287374 Query 10119 CCAAT 10123 || || Sbjct 287375 CCTAT 287379 >seq65 Length=298600 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||||||||| ||||| || |||||||| ||||||||||||| || || || || Sbjct 101183 CCTTCCTTGTCCTGAATTTTGGCCTTGACATTGTCGATGGTGTCTGACGACTCGACCTCG 101242 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||| || || || |||||||||||||| |||||||| ||||| Sbjct 101243 AGGGTAATCGTCTTACCCGTGAGGGTCTTAACGAATATTTGCAT 101286 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| ||||| ||||| || ||||||||||| || ||| || | ||||| || Sbjct 101029 ACCAAGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCACTGAGAGTACGGCCATCCTCC 101088 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356 | ||||| |||||||| || | | ||||||||| |||||||| Sbjct 101089 AGTTGCTTTCCGGCGAAGATCAAACGTTGTTGGTCAGGTGGAAT 101132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921595500146200