Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq120 147 4e-30 seq654 96.9 7e-15 >seq120 Length=370717 Score = 147 bits (162), Expect = 4e-30 Identities = 355/529 (67%), Gaps = 9/529 (2%) Strand=Plus/Minus Query 42424 TGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGA 42483 |||| || || || || || || ||||| ||||| || ||||| | | | ||| | Sbjct 287980 TGGCTTTTTTTGCTGCTTCCGATGGCATTGTCAACGAAAACCTTGTCGAGCGCTTCTCCA 287921 Query 42484 AAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACG 42543 | || || ||| ||| || ||||| ||||| ||||| ||||| || || ||| Sbjct 287920 ATGAAGTCCAGGCAGCTGAAGCTCGCTGTTTCTATGGCTTTCAGATCATGATGGAAAACA 287861 Query 42544 TGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGTA 42603 | || || || || | || | |||| |||||| ||| | | ||||| Sbjct 287860 TTCATTCCGAAACATATTCTCTCCTTATAGACACTTACATCAAGGACCAAGCTGAGCGCG 287801 Query 42604 ACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGC 42663 | || || | ||||| || || || ||||| || || |||||| || ||||| | Sbjct 287800 AGTACCTCTTTGATGCCATCGAAACCATTCCCTGTATTAAACGGAAGGCTGAATGGGCTC 287741 Query 42664 TCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCC 42722 | || |||||| | | || | | || |||| ||| || | || || ||| | || Sbjct 287740 TGAAGTGGATCTCT-GACAAGAACTCTACTTTCGCCGAACGGTTAGTTGCATTTGCGGCT 287682 Query 42723 GTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG 42782 || || |||||||||||||| ||| |||| || || ||||||||||| ||| | | | | Sbjct 287681 GTGGAAGGCATCTTCTTCTCAGGCTCCTTTGCATCAATCTTCTGGCTAAAG-AAACGTGG 287623 Query 42783 TC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAG 42841 || |||||||| | || ||||| ||||| || |||||| | || ||||| |||| | Sbjct 287622 TCTCATGCCCGGCTTGACTTTCTCAAACGAGCTTATCAGCCGTGATGAGGGTATGCACAC 287563 Query 42842 GGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA-AGGAGCGGG 42900 |||||||| ||||| || ||| ||||| |||| || |||| | | || Sbjct 287562 CGACTTTGCATGCCTTCTCTTC---AGCCATCTCAAGC-GTCGCCCCCAACCCGATACAA 287507 Query 42901 TCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 || ||| || ||||| || || || | |||||| | ||||||||||| Sbjct 287506 TCAAGGCTATTATCACAGAAGCGGTTGCCATCGAGCAAGAGTTCCTCAC 287458 Score = 134 bits (148), Expect = 3e-26 Identities = 312/465 (67%), Gaps = 13/465 (3%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA--GGTTCA 42480 || || ||||| || || || |||||||| || ||||||||||| || | | ||| Sbjct 289341 CTCGCATTCTTTGCTGCTTCCGACGGCATTGTGAATGAGAACCT--CCTTGAACGATTCT 289398 Query 42481 TGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 | || | ||| ||| || || ||||||||||||||||| ||| || || | Sbjct 289399 CCAGTGAAATTCAGGTAGCTGAAGCACGGTGCTTCTACGGCTTCCAAATAATGATGGAAA 289458 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGC 42600 | || ||||| || ||| | ||| || |||| |||||| |||||| | || | Sbjct 289459 ATGTTCACTCGGAAACTTACTCTCTACTTATCGACACCTACATCAAGGATCCAGAAGAAC 289518 Query 42601 GTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGG 42660 | || || ||| | ||||| || || || | || ||||| || || ||||||| Sbjct 289519 GGAAACATCTATTCGACGCCATCGAAACCATCTCATGTGTCAAGCGTAAAGCTGACTGGG 289578 Query 42661 CGCTCAACTGGATCG-AGAGTCCCGACG--CAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 | || | ||||| ||| || || | || || | || | || || || ||| Sbjct 289579 CTCTTAGATGGATATCAGA---CCAACAGTCCACCTTTGCGGAACGACTTGTTGCTTTTG 289635 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 |||| || || || || || ||||| || |||| || | || || ||| ||||| || Sbjct 289636 CCGCTGTAGAAGGAATATTTTTCTCTGGGTCCTTTGCTGCTATTTTTTGGATCAAGAAGC 289695 Query 42778 AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGC 42837 | | |||||| || ||||| ||||| || ||||||||||| | ||||| || || | Sbjct 289696 GTGGTTTGATGCCTGGTCTCACTTTCTCCAATGAACTCATCAGTCGCGACGAAGGCCTTC 289755 Query 42838 ATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA 42882 | | ||| ||||| || || | ||| | ||||||||||| || Sbjct 289756 ACACGGATTTTGCATGTCTATTATTC---ACCCACCTCAGGCGCA 289797 >seq654 Length=437428 Score = 96.9 bits (106), Expect = 7e-15 Identities = 193/279 (69%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 244298 CCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG--GGGCTGCCCTCGTAGGTCGGGT 244355 ||||| | ||| ||||| |||| || |||| |||| || || |||| ||||||| | Sbjct 47067 CCCCAAAGGTCGAACTGGAGCAATCC-TTGC-GACGCAGGACTACCCTGGTAGGTCTCAT 47124 Query 244356 AGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCT 244415 | || || || || |||| || || | || | || |||| ||||||||||| Sbjct 47125 ACGGTCCTTCTTTCTCCGCCATCTCGGTACTAGCCTCCAAAGCCGCGTGGTAGATGGTCT 47184 Query 244416 CGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG-GT-GAAGGGGATGCCCATCAT 244473 |||||||| |||| | || ||| |||| || || |||||| ||| || || Sbjct 47185 CGAAGATCTGAATGTTGAGCTCCTTGGC--GGCCGGAGAGTCGAAGGGCATGTGCAAAAT 47242 Query 244474 CATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGA 244533 |||||| | || || || || ||||| |||| || || || | ||| ||| |||| || Sbjct 47243 CATGAAAGCATCAGCGAGACCTTGCACACCGACACCAATAGGACGGTGACGCATGTTCGA 47302 Query 244534 GCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 ||| ||||||||| || |||||| | ||| | || || Sbjct 47303 GCGACGGGCTTCGGGGACAGGGTAATAATTGACATCAAT 47341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944311637099600