Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq641 194 4e-44 seq666 131 4e-25 seq318 89.7 1e-12 seq120 84.2 5e-11 >seq641 Length=242067 Score = 194 bits (214), Expect = 4e-44 Identities = 183/232 (79%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | ||| |||||||||| ||| |||||| ||||| || |||| Sbjct 74091 CATG-CCTCCACGGAGGCGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGT 74033 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| |||||||| || || | |||||| ||||||||||| ||||| |||||| | Sbjct 74032 CGGAGAGAGTGCGTCCATCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAG 73973 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || ||||||||||||||||| || || ||||| || || | ||| || | Sbjct 73972 GAGGGATACCCTCTTTATCCTGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACT 73913 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| ||||| || ||||||||||||||||| |||||||| Sbjct 73912 CGACCTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 >seq666 Length=522490 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || ||||| | ||| ||||| || || || || || | Sbjct 282241 CCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAA 282300 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | ||||| || || ||||||| || || || ||| Sbjct 282301 AGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGG 282360 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||| |||||||| || ||||| || || | || |||||| || Sbjct 282361 ATGCCTTCCTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACC 282420 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || |||||||| |||| ||||||||||| || ||||| Sbjct 282421 TCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 288268 AGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAAT 288327 ||||| | ||||| || || || || |||||||||| ||||| | |||||||| | | Sbjct 282034 AGATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGAGT 282093 Query 288328 TGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATT 288387 || || || || ||||| || || || || | || || ||||| || ||||| || Sbjct 282094 TGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCTGAATC 282153 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 |||||||||||||| || || | || ||| || ||||| | ||| |||||||| ||| Sbjct 282154 TTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTCCG 282213 Query 288448 GTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || || |||||||| Sbjct 282214 GTGAGCGTCTTCACAAAAATCTGCAT 282239 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| ||||| | ||| ||||| || ||||| | ||| || || ||||| Sbjct 282556 TTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGTTGCTTGCCGGCGAA 282615 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| || || ||| || || ||||| || ||||| || || || || ||||| Sbjct 282616 GATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAATCTTGGCCTTGACGTT 282675 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| ||| |||||| || || || ||||| ||||| || |||||||||||||| Sbjct 282676 ATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCTGTCAGAGTCTTGAC 282735 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 282736 AAAAATTTGCAT 282747 >seq318 Length=399281 Score = 89.7 bits (98), Expect = 1e-12 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 65523 TCGAGGGCGCGCTGAAGCTCAAAGAGATTTCGTATATTCATGCGGAAGGTTTTCATGGTG 65582 ||||||| || | ||| |||| || || ||||| ||| |||||||| ||| || || Sbjct 2363 TCGAGGGTGCTTTAAAGATCAAGGAAATCAGCTATATGCATTCGGAAGGTATTCTTGCTG 2304 Query 65583 GTGAGCTGAAGCATGGGCCTCTCGCTCTTATCGATGAGAAAACACCGGTCAT 65634 | ||||||||||| || ||||||||| | ||||||||||| | || ||||| Sbjct 2303 GAGAGCTGAAGCACGGTCCTCTCGCTTTGATCGATGAGAACATGCCTGTCAT 2252 >seq120 Length=370717 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 || || ||||| | || || ||| || || || || || |||||||||||| | || Sbjct 287379 ATAGGCATGAACTCGGACCTAATGCGCCAGTACATTGAGTTTGTGGCTGATCGTTTACTC 287320 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||| |||||| | || || || ||||| || ||||| || | ||| ||||| | Sbjct 287319 GTGGCCCTCGGTAACGACAAGGTCTACAACAAGACCAATCCATTTGACTTCATGGACATG 287260 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGT 269312 ||||| | |||| |||||||||||||| || ||||| || Sbjct 287259 ATTTCATTACAAGGCAAGACGAACTTCTTTGAGAAGCGGGT 287219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179619108058130