Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq120 86.0 1e-11 >seq120 Length=370717 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| ||||||||||| || ||||||| | ||||| || ||||| || || || || | Sbjct 289939 GCTCATTGGCATGAATGCTATACTCATGTGCCAGTATATTGAATTTGTCGCAGATCGACT 289998 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | | |||| || || | || ||| ||| || | |||||||| | |||||||| Sbjct 289999 TCTTGTCGCTCTGGGAAACGATAAATATTACGGTTCGCAAAACCCCTTCGATTTTATGGA 290058 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | ||||| | ||||| || || |||||||| |||||||| || Sbjct 290059 TATGATTTCTATGCAAGGAAAGACCAACTTCTTTGAAAAGCGGGT 290103 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || ||||||||||| || || ||| | |||||||| || || || || || || | Sbjct 287382 CTCATAGGCATGAACTCGGACCTAATGCGCCAGTACATTGAGTTTGTGGCTGATCGTTTA 287323 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | || || ||| | || || || |||||| | || || |||| ||| ||||| Sbjct 287322 CTCGTGGCCCTCGGTAACGACAAGGTCTACAACAAGACCAATCCATTTGACTTCATGGAC 287263 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | ||||| | ||||| || || |||||||| || ||||| || Sbjct 287262 ATGATTTCATTACAAGGCAAGACGAACTTCTTTGAGAAGCGGGT 287219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102847004932250