Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq666 100 3e-16 >seq666 Length=522490 Score = 100 bits (110), Expect = 3e-16 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 42001 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 42060 ||| ||||| ||||||||||| || || || || || | || |||| | |||| || | Sbjct 282032 CCAGATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGA 282091 Query 42061 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGA 42120 | ||||| || || || || || || |||||||| | || | | ||||||||| ||| Sbjct 282092 GTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCC-TGA 282150 Query 42121 TTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 | || | || ||| | | | |||||| ||| ||||| || | ||| || || || Sbjct 282151 ATCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTT 282210 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || |||||||| ||||| || ||||| Sbjct 282211 CCGGTGAGCGTCTTCACAAAAATCTGCAT 282239 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||||||||| || | ||||| || | || || || ||||| || ||||| Sbjct 282557 TCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGTTGCTTGCCGGCGAAG 282616 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || | || ||||| |||| || | | ||||||||| ||| | || | |||| | Sbjct 282617 ATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCC-TGAATCTTGGCCTTGACGTT 282675 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| |||||| || || | |||||||| || || || || ||||| || Sbjct 282676 ATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCTGTCAGAGTCTTGAC 282735 Query 42197 AAAGATTTGCAT 42208 ||| |||||||| Sbjct 282736 AAAAATTTGCAT 282747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543196944976400