Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq666 105 7e-18 seq641 98.7 1e-15 seq120 84.2 2e-11 >seq666 Length=522490 Score = 105 bits (116), Expect = 7e-18 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || ||||| |||||| | || | | ||| |||||||| || || | | | Sbjct 282048 CTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGAGTTGCTTGCCCGCAAA 282107 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 |||||| || || ||||| || || |||||||| ||||| ||| | || | ||| | | Sbjct 282108 GATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCC-TGAATCTTCGCTTTCACGT 282166 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 ||| | | ||||| | ||||||||| || | ||| | ||| || || || || || || Sbjct 282167 TGT-CAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTCCGGTGAGCGTCTTC 282225 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 282226 ACAAAAATCTGCAT 282239 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||| ||||| || | ||||| || ||||| ||||| |||| Sbjct 282832 GATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTGTTTTCCGGCG 282891 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| | ||| || ||||| || || |||||||| || || ||| || ||| | | Sbjct 282892 AAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTTGGTTTTGACA 282951 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | ||| |||| ||||||||||| | || | || || ||||||| || || Sbjct 282952 TTGT-CGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGGTCTT 283010 Query 138600 TACAAAAATCTGCAT 138614 ||||||||||||||| Sbjct 283011 TACAAAAATCTGCAT 283025 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| ||| | ||| | | ||||| || ||||||||||| || Sbjct 282241 CCACCGCGGAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAA 282300 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||| || ||||| |||| | |||| | || || ||||| || || Sbjct 282301 AGAGTGCGGCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGG 282360 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| |||| | || | | || | ||||| | ||| || || Sbjct 282361 ATGCCTTCCTTGTC-CTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAAC 282419 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||| | || || || |||| || || || ||||| ||||| Sbjct 282420 CTCGAGCGTAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| ||||| |||||||| | ||| || || || ||||| || |||| Sbjct 282554 GATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGTTGCTTGCCGGCG 282613 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| | || || || || |||||||||||||| ||||| ||| | || | || | Sbjct 282614 AAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTC-CTGAATCTTGGCCTTGAC 282672 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||||| ||| || ||||| | || | || || || |||||||| || Sbjct 282673 GTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCTGTCAGAGTCTT 282732 Query 138600 TACAAAAATCTGCAT 138614 |||||||| ||||| Sbjct 282733 GACAAAAATTTGCAT 282747 >seq641 Length=242067 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || |||||||||||| | ||| || |||||||||||||| || | Sbjct 74054 GATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCCTCGAGTTGTTTGCCTGCG 73995 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| ||||| || ||||| ||||| ||||| || |||||| || | Sbjct 73994 AAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCCTGGATTTTAGCCTTGACG 73935 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| || | ||||| ||||| | || | || || ||||||||||| || Sbjct 73934 TTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTG 73875 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 73874 ACGAAGATCTGCAT 73861 >seq120 Length=370717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTT 52709 || || || ||| | || | ||||||||| || | ||| || ||||||| |||||| Sbjct 287397 GCTCTCCCTGTCAAACTCATAGGCATGAACTCGGACCTAATGCGCCAGTACATTGAGTTT 287338 Query 52710 GTGGCGGATCGTCTGTTGGTGCAGCTCGGGCA-GCCAAAGTACTTCAACGCTCGCAATCC 52768 ||||| |||||| | | ||| ||||| | | ||| || || |||| |||||| Sbjct 287337 GTGGCTGATCGTTTACTCGTGGCCCTCGGTAACGACAAGGT-CTACAACAAGACCAATCC 287279 Query 52769 GTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 ||||| || ||| ||| ||||| | | |||||||| ||||| || |||||||| || Sbjct 287278 ATTTGACTTCATGGACATGATTTCATTACAAGGCAAGACGAACTTCTTTGAGAAGCGGGT 287219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496247915341200