Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq666 98.7 9e-16 seq641 87.8 2e-12 >seq666 Length=522490 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 ||||| || || |||||||||||||| | || ||| ||| || ||||||||||| Sbjct 282829 GTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTGTTTTCCG 282888 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| || ||||| || || || || || ||||| || ||| || ||| Sbjct 282889 GCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTTGGTTTTG 282948 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | ||| || || | ||| | || || || |||| || Sbjct 282949 ACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGGTC 283008 Query 127097 TTTACAAAAATCTGCAT 127113 ||||||||||||||||| Sbjct 283009 TTTACAAAAATCTGCAT 283025 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || ||||||||||| || | |||||| ||| || || || || || Sbjct 282551 GTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGTTGCTTGCCG 282610 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||| || ||||||||||||||||| || ||||||||| || || |||| Sbjct 282611 GCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAATCTTGGCCTTG 282670 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||||| | || || || | || | || || || |||||||| Sbjct 282671 ACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCTGTCAGAGTC 282730 Query 127097 TTTACAAAAATCTGCAT 127113 || |||||||| ||||| Sbjct 282731 TTGACAAAAATTTGCAT 282747 >seq641 Length=242067 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || ||||| |||||| | || || ||| || || || || ||| Sbjct 74285 GTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGTTGCTTGCCA 74226 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || || ||||| ||||| || ||||||||||| || ||| ||| Sbjct 74225 GCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATCTTCGCCTTA 74166 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | | || ||||| | ||| | || ||||| |||| ||| Sbjct 74165 ACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCCGTCAAAGTC 74106 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||| ||||||||| || Sbjct 74105 TTGACAAAGATCTGCATGCCT 74085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475486921320400