Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq120 150 2e-31 seq654 141 1e-28 >seq120 Length=370717 Score = 150 bits (166), Expect = 2e-31 Identities = 354/526 (67%), Gaps = 19/526 (4%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||| |||||| ||| || || || ||||| || || Sbjct 287554 GCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAAGCCG 287613 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| || ||||| | |||||| || | ||| ||||| ||||||||||| Sbjct 287614 GGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAAGATG 287673 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATCA-- 127696 || |||||| ||| || |||| || || ||||| |||| | || || | ||| Sbjct 287674 CCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTA----GAGTTCTTGTCAGA 287729 Query 127697 -AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTC 127755 | |||||||| ||||| | ||||| | ||||| || | ||| | ||| || || Sbjct 287730 GATCCACTTCAGAGCCCATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCATC 287789 Query 127756 AAAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 |||||| | || || | | | || |||||||| | ||||| || |||||||| Sbjct 287790 AAAGAGGTACTCGCGCTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGAATATGT 287849 Query 127816 TTCGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 127874 |||| || | ||| ||| || | |||| | | |||||| |||| ||||| | Sbjct 287850 TTCGGAATGAATGTTTTCCATCAT-GATCTGAAAGCCATAGAAACAGCGAGCTTCAGCTG 287908 Query 127875 TCTGTACCTCATCGGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACC 127931 ||| || |||| || || | | || | || || ||||| |||||||| Sbjct 287909 CCTGGACTTCATTGGAGAA---GCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGAAG 287965 Query 127932 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGG-GT--CT 127988 |||||||||| |||| | | | || || | | ||||| || || ||| || | Sbjct 287966 CAGCAAAAAAAGCCAAAACGTGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTCAT 288025 Query 127989 TCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||| |||| || ||||| || ||||| | |||||| || ||||| Sbjct 288026 TCCAATCGTAAAGGTCCTTGGAAAGATCCATCTCCTCAGCCGTCCA 288071 Score = 129 bits (142), Expect = 7e-25 Identities = 349/527 (66%), Gaps = 19/527 (4%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| || || ||||| || |||||||||||| ||||| ||||| Sbjct 289768 GCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAGACCA 289709 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | ||| |||||||| | ||| ||||| ||| ||| || |||||||| || || Sbjct 289708 GGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCAAAGGACCCAGAGAAAAATATT 289649 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGAC--TTTGTATCA- 127696 || || ||| || || |||| || || || ||||||| |||| || || | | Sbjct 289648 CCTTCTACAGCGGCAAAAGCAACAAGTCGTTCCGCAAAGG---TGGACTGTTGGTCTGAT 289592 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | ||| | | ||||| | || || || || ||||| || ||| | ||| || || Sbjct 289591 ATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGTCG 289532 Query 127757 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 || || | ||| |||| |||||| |||||||| | || || ||| || || ||| Sbjct 289531 AATAGATGTTTCCGTTCTTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTAAGTT 289472 Query 127817 TCGCCGTGGACCATT----TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 127872 || ||| || || ||||||| || | ||||||| | || ||||| Sbjct 289471 TCCGAGTGAACATTTTCCATCATTAT----TTGGAAGCCGTAGAAGCACCGTGCTTCAGC 289416 Query 127873 TATCTGTACCTCATCGGCAAAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACC 127931 || ||| | ||| | | | ||| ||| | || |||||| ||||| || ||||| Sbjct 289415 TACCTGAATTTCA-CTGGAGAATCGTTCAAGGAGGTTCTCATTCACAATGCCGTCGGAAG 289357 Query 127932 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAGGGT---CT 127988 ||||||| || || |||| | ||||| | | |||| | ||| || | | Sbjct 289356 CAGCAAAGAATGCGAGGACGTGAGAGATGAAATACCGTTCGCTGGAGTTGAGCTTATGAT 289297 Query 127989 TCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAA 128035 |||| || |||||| | ||||||||| ||||| || |||||| Sbjct 289296 TCCAATCCATGAGATCGTGGCAGAGATCTATTTCCTCTGCGGTCCAA 289250 >seq654 Length=437428 Score = 141 bits (156), Expect = 1e-28 Identities = 576/909 (63%), Gaps = 69/909 (8%) Strand=Plus/Plus Query 115915 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 115974 ||||| || || |||||||||||| ||||||||| || || ||||| |||||||| Sbjct 46920 GTGTAGGGTTCGAAGCACTCATTGAAACCCAAGATCTGACTGGTCGAGGCAGTGGGCATA 46979 Query 115975 GGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCC 116034 || || || ||| ||||| ||||| | || |||||||| | | || Sbjct 46980 GGAGCACACAGCAGGGAATTGCGAAGACCAGTTCGTGCGATCTTCTCCTTGAGCGAGGCC 47039 Query 116035 CAGTCGTAGTTGA-GCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGA 116093 ||||| | | | | | | | | |||| | || |||||||| | ||||| || Sbjct 47040 CAGTCCCACAAGCCGGTGGGGGTAACTC-CCCAAAGGTCGAACTGGAGCAATCCTTGCGA 47098 Query 116094 CGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGC 116153 ||| || |||| | |||||||| || || || |||||||| |||| || || Sbjct 47099 CGCAGGACTACCCTGGTAGGTCTCATACGGTCCTTCTTTCTCCGCCATCTCGGTACTAGC 47158 Query 116154 CTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTC 116213 ||| | || ||||| || || ||||| || || || || | ||||||| | Sbjct 47159 CTCCAAAGCCGCGTGGTAGATGGTCTCGAAGATCTGAATGTTGAGCTCCTTGGCGGCCGG 47218 Query 116214 GGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCC 116273 || || || | | | | | || || |||| ||||||||||| ||||||| || Sbjct 47219 AGAGTCGAAGGGCATGTGCAAAATCATGAAAGCATCAGCGAGACCTTGCACACCGACACC 47278 Query 116274 AATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC----ACGGGATAAAAATTCC 116329 ||| || || || | ||| || || ||| ||| || | || || ||| |||| Sbjct 47279 AATAGGACGGTGACGCATGTTCGAG---CGA-CGGGCTTCGGGGACAGGGTAATAATTGA 47334 Query 116330 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 116389 ||| || | | ||| | ||| | | ||||||||| || | || || || || | | Sbjct 47335 CATCAATGATACGATTCAAATTGTAAGCGACAACCTTGGTAACATCGTGGAGTTTCTGGA 47394 Query 116390 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 116449 ||||| | || | ||| |||| | || ||||||||||| || |||| ||| | Sbjct 47395 AATCATA-----GACACCATTC-TTGATAAACGAAGGAAGGGCGAGAGAAGCCAAATTGC 47448 Query 116450 ACACAGAGGTCTCATCCTTATCA-GTGTACTCTATAATTTCCGTACACAAATTTGAACTC 116508 | || | || ||||| | | | | |||||| || |||||||| |||| || ||| | Sbjct 47449 AGACGGCAGTTTCATC-TGGTGACGAGTACTCAATGATTTCCGTGCACAGGTTAGAAGAC 47507 Query 116509 TTAATGGTGCCCAAGTTCTTTTGATTTGACTT---------------------TG----- 116542 || ||||| || | ||||||||| || || || || Sbjct 47508 TTGATGGTCCCAAGGTTCTTTTGGTTGGATTTACCTGCGGGGACATGAATGGTTGACCAA 47567 Query 116543 --------TGTTA---------CAC--------GCATCCTTGTAGAGCATATATGGCGTC 116577 || || ||| ||||||||||| |||||| |||| Sbjct 47568 AAGAATCATGATAATCAGTACCCACTGTTGGCGGCATCCTTGTAAAGCATAAATGGTCCT 47627 Query 116578 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAGTGGCG 116637 || ||||| |||||| || |||||| || | ||| | | || || ||||| Sbjct 47628 CCAGTCTCGATTTGGGCCTCGAGAATCGCATACCAAAGTTTCTGAGCAGGAACAGTCTTC 47687 Query 116638 TTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC 116697 || || || || | ||||||||| ||| | ||||||||||||||||| || | | Sbjct 47688 TTAGCACGTTTTTCGTTCTCGTACTTCGTGAACAGGGCCTCAAACTCTTCGCCATGAACA 47747 Query 116698 TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACC 116757 || | || ||||| || | | || ||||| || | ||| | ||||||| ||||||| Sbjct 47748 TCAGCAAGTCCTGGGGCTTCGTTGGGGCAGAAAAGTGGCCAGTCACCACCCGCCTCAACG 47807 Query 116758 CGCTTCATG 116766 ||||||||| Sbjct 47808 CGCTTCATG 47816 Score = 91.5 bits (100), Expect = 2e-13 Identities = 175/257 (68%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 115508 CACACTCGGGTTCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGT 115567 ||| ||| ||| | || |||||||||||| | || | | | | |||||||||| Sbjct 46459 CACGCTCTGGTCGACGG-TGAACTGAATGGCTTGAGCAGCAGGCCTCGTGCGGAGGTAGT 46517 Query 115568 ACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGA 115627 |||| ||||||||||| |||| ||||||| |||| | ||||| | || || | || Sbjct 46518 ACATTCCCGTCTTGAGACCCTTCTTCCAGCCATAGAAGTGCATGCTTGTCAGCTGGCCGA 46577 Query 115628 GTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGAT 115687 | || || || || | || ||||| ||||||| || ||| ||| || |||| Sbjct 46578 GAGTCGGGGCTTGCAAGTGGACGTTCAAACTTTGGCTCTGGCAGATAAAGGCCCCACGAT 46637 Query 115688 CCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCT 115747 | || || | || || || | |||| |||| ||||| ||||| |||||| || Sbjct 46638 CAGCAGCGAGGTCGATAACTTTCTTCTGGCTGATCTCCCAGACAGTCTTGTAGATTGCCT 46697 Query 115748 TAATATCATCTGGGATA 115764 | | ||||| |||||| Sbjct 46698 TGACGTCATCAGGGATA 46714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613489293258600