Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq654 96.9 6e-15 seq120 87.8 3e-12 >seq654 Length=437428 Score = 96.9 bits (106), Expect = 6e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 203838 TCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGC 203897 ||| ||| || |||||||||||||| | | |||||||| | | || |||||||| | Sbjct 46464 TCTGGTCGACGGTGAACTGAATGGCTTGAGCAGCAGGCCTCGTGCGGAGGTAGTACATTC 46523 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| || ||||||| ||| || || | ||||||| | ||| | || | | | Sbjct 46524 CCGTCTTGAGACCCTTCTTCCAGCCATAGAAGTGCATGCTTGTCAGCTGGCCGAGAGTCG 46583 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 || | || ||| | ||||| | ||||| ||| ||| |||||| || ||||| || Sbjct 46584 GGGCTTGCAAGTGGACGTTCAAACTTTGGCTCTGGCAGAT-AAAGGCCCCACGATCAGCA 46642 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 || | | ||||| ||||||| |||||||| || |||||| Sbjct 46643 GCGAGGTCGATAACTTTCTTCTGGCTGATCTCCCAGACAGTCTTG 46687 >seq120 Length=370717 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || ||||| ||||||||| ||||| ||||| || || ||| | |||||| || Sbjct 287542 AAGAGAAGGCATGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAG 287601 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | | ||| ||||||| ||||| || ||||| || || | ||||| | || Sbjct 287602 AAAGTCAAGCCGGGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCT 287661 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| || ||||| |||||||| || || | || || | |||| | ||| Sbjct 287662 GAGAAGAAGATGCCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTAGAGTTC 287721 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTC 160129 ||||| | ||||| | ||||||||||||||| Sbjct 287722 TTGTCAGAGATCCACTTCAGAGCCCATTCAGCCTTC 287757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795131991407600