Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq666 118 2e-21 seq641 102 2e-16 seq458 93.3 1e-13 seq65 87.8 4e-12 >seq666 Length=522490 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||||||||| || || ||||| || | |||||||| | | ||| | |||||||| | Sbjct 282540 CAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAA 282599 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 | ||||| ||||||||||| | || ||||| || ||| || ||||| ||||||| Sbjct 282600 GTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAA 282659 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| || | ||||| | | ||| || || | ||||| ||||| | Sbjct 282660 TCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTC 282719 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || ||||| || ||||||||||| Sbjct 282720 CTGTCAGAGTCTTGACAAAAATTTG 282744 Score = 111 bits (122), Expect = 4e-19 Identities = 138/189 (73%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 |||||| || | ||| ||||| | | ||||| || ||||| || ||||| || || || Sbjct 282048 CTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGAGTTGCTTGCCCGCAAA 282107 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 ||| || || |||||||| || ||| ||||| ||||||||||| |||||| Sbjct 282108 GATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCTGAATCTTCGCTTTCACGTT 282167 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 || | ||||| | | || || |||||||| |||||||| || ||||| || ||||| Sbjct 282168 GTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTCCGGTGAGCGTCTTCAC 282227 Query 199618 AAAAATTTG 199626 |||||| || Sbjct 282228 AAAAATCTG 282236 >seq641 Length=242067 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || || || || || || |||| ||||||||| | | ||| | |||||| Sbjct 74072 AGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCC 74013 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || |||||||||||||| || || || ||| || || ||| ||| Sbjct 74012 TCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCC 73953 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||| ||| |||| ||| |||| || || || || | ||||| ||| Sbjct 73952 TGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGTC 73893 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || Sbjct 73892 TTGCCAGTCAGAGTCTTGACGAAGATCTG 73864 Score = 89.7 bits (98), Expect = 1e-12 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 |||||||| || || |||||| | |||||||| ||||| | | ||||||||| ||||| Sbjct 73486 CTTATCTTTGCTGGGAAGCAGCTCGAAGATGGGAGGACGCTCTCTGATTACAACATCCAG 73545 Query 200995 AAAGAGTCTACTCTTCACCTTGTT 201018 ||||||||||||||||| || ||| Sbjct 73546 AAAGAGTCTACTCTTCATCTAGTT 73569 >seq458 Length=497640 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAA-AGTCCTTCCATC 199476 ||||| | ||| ||||| ||||||||||||| |||||| || || || || | ||||| Sbjct 148000 AGGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATC-GCTAAGGGTGCGACCATC 148058 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || ||||||||||| |||||||| || ||||||||||| ||| Sbjct 148059 CTCAAGCTGCTTTCCAGCGAAGATCAGGCGCTGCTGGTCGGGA 148101 >seq65 Length=298600 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || ||||||||||| |||| ||| |||||| | ||| | ||||| Sbjct 101026 AGGACCAAGTGAAGCGTCGACTCCTTCTGGATGTTATAGTCACTGAGAGTACGGCCATCC 101085 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||| ||||||||||||||||| | ||| || ||||| || Sbjct 101086 TCCAGTTGCTTTCCGGCGAAGATCAAACGTTGTTGGTCAGG 101126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178886329981445