Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq120 239 5e-58 seq641 113 5e-20 >seq120 Length=370717 Score = 239 bits (264), Expect = 5e-58 Identities = 389/555 (70%), Gaps = 15/555 (3%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| ||||||||| |||| ||||| || | | || || ||||| ||||||||| Sbjct 287550 GCATGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGAAAGTCAA 287609 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 |||||||||||| || ||||| || ||||| || || | || || ||| || ||||| Sbjct 287610 GCCGGGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTGAGAAGAA 287669 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 || ||| || || ||||| || || || | || ||| |||| || | | ||| | Sbjct 287670 GATGCCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTAGAGTTCTTGTCAGA 287729 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133 |||||| ||| |||||||| ||||| ||| | || || || ||||||||||| | Sbjct 287730 GATCCACTTCAGAGCCCATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGATGGCAT- 287788 Query 133134 CAACAAACGGAGTTTCTCT---TCCGA--GGAACGC-ACGTAGGTGTCGATGAGGGTCGA 133187 |||| ||| | ||| || | || | | ||| ||||| || ||| || Sbjct 287789 ---CAAA--GAGGTACTCGCGCTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAGA 287843 Query 133188 ATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTC 133247 ||| |||| || || | ||| ||||| ||| |||||||| || || || || || || Sbjct 287844 ATATGTTTCGGAATGAATGTTTTCCATCATGATCTGAAAGCCATAGAAACAGCGAGCTTC 287903 Query 133248 GACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCT 133307 | |||| ||||| | | ||| |||||||| || ||||||||||| ||||| ||| Sbjct 287904 AGCTGCCTGGACTTCATTGGAGAAGCGCTCGACAAGGTTTTCGTTGACAATGCCATCGGA 287963 Query 133308 GGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC 133367 || || ||||| |||| |||||| ||| || |||||||| ||||| || | ||| || Sbjct 287964 AGCAGCAAAAAAAGCCAAAACGTGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTTC 288023 Query 133368 ---CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTC 133424 ||| ||| ||||||||| || |||| |||||| | ||||| || || || || Sbjct 288024 ATTCCAATCGTAAAGGTCCTTGGAAAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTTC 288083 Query 133425 GGCTTTTTTGTACAT 133439 || ||||||||||| Sbjct 288084 TGCCTTTTTGTACAT 288098 Score = 138 bits (152), Expect = 1e-27 Identities = 352/528 (67%), Gaps = 17/528 (3%) Strand=Plus/Minus Query 132931 ATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATG 132990 |||||||| ||| |||||| | || ||||| | || || || |||| |||||| || Sbjct 289735 ATGAGTTCATTGGAGAAAGTGAGACCAGGCATCAAACCACGCTTCTTGATCCAAAAAATA 289676 Query 132991 GCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCG 133050 || || || || || || || | || || || || || ||||| || || || || Sbjct 289675 GCAGCAAAGGACCCAGAGAAAAATATTCCTTCTACAGCGGCAAAAGCAACAAGTCGTTCC 289616 Query 133051 CCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACG 133110 | || |||| | || | | ||||| | || ||||| || || || ||||| Sbjct 289615 GCAAAGGTGGACTGTTGGTCTGATATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACA 289556 Query 133111 CACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTC---TCTTCCGAGGAACGC--A 133165 || | || ||||||||||||| || | | | |||| ||||| | || | | Sbjct 289555 CATGAGATGGTTTCGATGGCGTCGAATAGATG---TTTCCGTTCTTCTG--GATCCTTGA 289501 Query 133166 CGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAA 133225 |||||||||||| || || || |||||||||| || || ||||| ||||| | Sbjct 289500 TGTAGGTGTCGATAAGTAGAGAGTAAGTTTCCGAGTGAACATTTTCCATCATTATTTGGA 289441 Query 133226 AGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGAT 133285 ||||||| |||||||| || || | ||||| | ||| | ||| || || | || | Sbjct 289440 AGCCGTAGAAGCACCGTGCTTCAGCTACCTGAATTTCACTGGAGAATCGTTCAAGGAGGT 289381 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | || || || ||||||||| || || || || || || ||||| |||||||| | Sbjct 289380 TCTCATTCACAATGCCGTCGGAAGCAGCAAAGAATGCGAGGACGTGAGAGATGAAATACC 289321 Query 133346 GCTCGTTGTCGTTCAAGC----GCTCCCAGTCGCGCGTG-TCCTTGGACAGGTCCACCTC 133400 | ||| || ||| ||| | | ||| || | | | || | | | || || | || Sbjct 289320 GTTCGCTGGAGTT-GAGCTTATGATTCCAATC-CATGAGATCGTGGCAGAGATCTATTTC 289263 Query 133401 CTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACAT 133448 ||| |||||||||| ||||||| || ||||| || | | |||| || Sbjct 289262 CTCTGCGGTCCAAAATGACGCCTGTGCCTTTTTATAAAAATTCCATAT 289215 >seq641 Length=242067 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || |||||| | || |||||| | | Sbjct 73861 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCATCA 73920 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | ||||||| || |||||||| || || | || || Sbjct 73921 GATACCATCGACAACG-TCAAGGCTAAAATCCAGGATAAAGAGGGTATCCCTCCTGATCA 73979 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||| | ||| |||||||| || || || | ||||| ||| ||||||||| Sbjct 73980 ACAACGTCTCATCTTCGCAGGCAAACAACTCGAGGATGGACGCACTCTCTCCGACTACAA 74039 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| || ||| | || || ||| | || || || Sbjct 74040 CATCCAGAAAGAATCCACCCTTCATCTCGTCCTTCG 74075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500158201206400