Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq641 123 1e-22 seq666 120 1e-21 seq470 113 2e-19 seq510 111 6e-19 >seq641 Length=242067 Score = 123 bits (136), Expect = 1e-22 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || |||| || || ||||| || ||||| |||||||| ||| Sbjct 74089 ATGCAGATCTTTGTCAAGACTTTGACGGGCAAGACTATAACCCTTGAAGTTGAATCTTCT 74148 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || |||| || |||||||| ||||| || ||||||||||||||| Sbjct 74149 GACACGATCGATAACGTTAAGGCGAAGATTCAAGACAAGGAGGGTATTCCTCCTGATCAA 74208 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || || |||||||| ||||| |||| | | ||||||||| Sbjct 74209 CAACGTCTTATCTTCGCTGGCAAGCAACTTGAGGATGGGCGAACCCTCTCCGATTATAAT 74268 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | ||||| | ||||| || Sbjct 74269 ATACAGAAGGAATCGACACTGCA 74291 Score = 114 bits (126), Expect = 5e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || |||||||| || ||||| || ||||| || || ||||| Sbjct 73861 ATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACTATCACCCTTGAGGTCGAGTCATCA 73920 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | || ||||| || ||||| || || || |||||||||||| Sbjct 73921 GATACCATCGACAACGTCAAGGCTAAAATCCAGGATAAAGAGGGTATCCCTCCTGATCAA 73980 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| |||| |||||||| || |||||| | ||| | | || || || Sbjct 73981 CAACGTCTCATCTTCGCAGGCAAACAACTCGAGGATGGACGCACTCTCTCCGACTACAAC 74040 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 || | || || | || ||||| Sbjct 74041 ATCCAGAAAGAATCCACCCTTCA 74063 >seq666 Length=522490 Score = 120 bits (132), Expect = 1e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || || || ||||||| || || || || ||||| || || || || Sbjct 283026 AATGCAGATTTTTGTAAAGACCTTGACTGGGAAGACCATCACCCTTGAGGTGGAGTCCTC 282967 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||| || | | ||| || || |||||||||||||| ||||| ||||| || Sbjct 282966 CGATACCATCGACAATGTCAAAACCAAGATCCAAGATAAGGAAGGTATTCCCCCTGACCA 282907 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| || ||| | || ||||| || |||||||| | || | | ||||| || Sbjct 282906 GCAACGTTTGATCTTCGCCGGAAAACAGCTCGAAGATGGTCGTACACTTTCTGATTACAA 282847 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 |||| | ||||| | || ||||| Sbjct 282846 TATTCAGAAGGAATCTACCCTTCA 282823 Score = 116 bits (128), Expect = 1e-20 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || ||||| || || || || |||||||| |||||||| || Sbjct 282747 ATGCAAATTTTTGTCAAGACTCTGACAGGAAAGACCATCACTCTTGAGGTTGAATCGTCC 282688 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | || || ||||| || |||||||| || ||||| ||||| Sbjct 282687 GACACTATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGTATACCTCCCGATCAG 282628 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || ||| | || || |||||||||||||| | ||| | |||| || ||| Sbjct 282627 CAACGCTTGATCTTCGCCGGCAAGCAACTTGAAGATGGTCGCACTCTCTCGGACTACAAT 282568 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| | || || ||| Sbjct 282567 ATTCAGAAGGAATCCACCCTCCAC 282544 >seq470 Length=339658 Score = 113 bits (124), Expect = 2e-19 Identities = 199/290 (69%), Gaps = 9/290 (3%) Strand=Plus/Minus Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373 ||| | |||| || |||| || || ||||| ||||||||||| ||||| ||||| || | Sbjct 299718 TTAGTCATGCTGTCGTTACCGTGCCTGCTTACTTCAATGATGCCCAACGACAAGCGACCA 299659 Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433 | ||||| ||||| |||||||| | ||||||| || | || || |||||||| || | Sbjct 299658 AGGATGCCGGACAAATTGCTGGCCTTGATGTTCTACGTGTGATCAACGAACCTACTGCGG 299599 Query 451434 CTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTAT 451493 ||||||| || || || | | ||| | || ||| || | Sbjct 299598 CTGCTCTTGCTTACGGTTTGG----ATC-----GCGCTGACTCCTCTGTCATTGCTGTCT 299548 Query 451494 TTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTG 451553 |||| |||||||||||||| ||||| |||| | ||| ||| || | || || || | Sbjct 299547 ATGATCTTGGTGGAGGAACTTTTGATATTTCTATCCTTGAAATGCAAAAGGGTGTCTTCG 299488 Query 451554 AAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 | || || |||| || ||||| || || || || || || ||| ||||| Sbjct 299487 AGGTCAAATCAACAAACGGTGACACCCACCTCGGTGGCGAGGATTTTGAT 299438 >seq510 Length=242540 Score = 111 bits (122), Expect = 6e-19 Identities = 242/362 (67%), Gaps = 3/362 (1%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || ||||||||||| || |||||||| || ||||| || || || ||| || | Sbjct 80486 CCCGAAGAAATTTCGTCCATGGTTCTCCTCAAGATGAAGGAGACCGCTGAATCTTACCTC 80545 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | | | | | || || |||| |||||||| || ||||| || | || || Sbjct 80546 GGAACGACCATAAACAACGCTGTCGTTACCGTTCCCGCCTACTTCAACGACTCGCAGCGT 80605 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 ||||| || || || || || ||| | ||| | || || || || || || ||||| Sbjct 80606 CAAGCTACCAAGGACGCTGGCACCATTTCCGGTCTCAACGTCCTCCGTATCATCAATGAG 80665 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || ||||| || || | || ||||| || | || || | || | ||| ||| Sbjct 80666 CCAACAGCTGCCGCCATTGCTTATGGCCTCGACAAG---AAGGTGACCGGAGAGCGCAAT 80722 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 |||| | || ||| ||||||||||||| |||| ||| | || | || ||||| Sbjct 80723 GTTTTGATCTTCGATCTTGGTGGAGGAACCTTTGATGTTTCACTTCTCACCATCGAAGAA 80782 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || | || || || ||||| ||| |||||||| || | || ||||||||| ||||| Sbjct 80783 GGTATTTTCGAGGTCAAGGCTACCGCCGGTGATACCCACTTGGGTGGTGAAGATTTTGAT 80842 Query 451604 AA 451605 || Sbjct 80843 AA 80844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975659292062180