Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq510 109 4e-18 seq10 91.5 1e-12 >seq510 Length=242540 Score = 109 bits (120), Expect = 4e-18 Identities = 194/283 (69%), Gaps = 0/283 (0%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| ||||||||||||||||| ||||| | |||| || | ||||| | || Sbjct 80853 ACGAGACGGTTATCAAAATCTTCACCACCCAAGTGGGTATCACCGGCGGTAGCCTTGACC 80794 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||||| || ||||| | | | ||| | |||||| |||||| ||||| | ||| Sbjct 80793 TCGAAAATACCTTCTTCGATGGTGAGAAGTGAAACATCAAAGGTTCCTCCACCAAGATCG 80734 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 || || | ||||| ||| | || || || || ||||| |||| || ||| Sbjct 80733 AAGATCAAAACATTGCGCTCTCCGGTCACCTTCTTGTCGAGGCCATAAGCAATGGCGGCA 80674 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 || ||||| ||||| || || | | || || ||||| | ||| | || || || || Sbjct 80673 GCTGTTGGCTCATTGATGATACGGAGGACGTTGAGACCGGAAATGGTGCCAGCGTCCTTG 80614 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 518297 || ||||| | || || ||||| || || || ||||| |||| Sbjct 80613 GTAGCTTGACGCTGCGAGTCGTTGAAGTAGGCGGGAACGGTAA 80571 >seq10 Length=134962 Score = 91.5 bits (100), Expect = 1e-12 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914 ||||||||||||||| | | || |||||||||||||| |||||||| | ||||| ||| Sbjct 108617 GGTAAAGAAGGTCGTCTGCGTGGCAATTTGATGGGAAAGCGTGTCGACTTTTCTGCGCGT 108676 Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCC 668964 || ||||| || |||||| ||| | | ||| | || || |||||||| Sbjct 108677 ACGGTTATCACAGGTGATCCTAATTTGGAGCTCGACGAGGTCGGTGTTCC 108726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780706529608510