Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq510 239 6e-58 seq654 86.0 8e-12 seq470 86.0 8e-12 >seq510 Length=242540 Score = 239 bits (264), Expect = 6e-58 Identities = 554/845 (66%), Gaps = 64/845 (8%) Strand=Plus/Minus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 || || || || || | || || || || || ||||| |||||||| || | || || Sbjct 81326 ATAGCAGCCTGAACAGCAGCTCCATAAGCAACGGCCTCGTCGGGGTTGATGCTCTTGTTG 81267 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || || ||||| || | || || | | | ||| || || || || || Sbjct 81266 GGCTCCTTGCCGTTGAAGAAGTCGGACACAAGCTTGACAATACGAGGAATACGCGTAGAA 81207 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 |||||||| | ||| || || | ||| || | ||||||||||| || || || || Sbjct 81206 CCACCGACAAGAACAATCTCGTGCACATTAGCCTTATCGATCTTGGAATCACGGAGAACC 81147 Query 7202 TTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258 || ||||| || || | ||| ||||| | |||| |||| || || || || Sbjct 81146 TTCTCGACCGGCTCGAGCGTACCG---CGGAAGAGGTCCTGGCACAACTCTTCGAACCGA 81090 Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318 |||||||||| ||| || |||||||||| ||| ||||| | ||| ||||||||||||| Sbjct 81089 GCACGGGTAAGGGAAGTGTAGAAATCAATGCCCTCGTAGAGCGAGTCAATTTCAATGGAA 81030 Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378 || || || | || || | || ||||| || ||||| || || || || | ||||||| Sbjct 81029 GTCTGAGCGGCAGAGGAAAGGGTGCGCTTGGCACGCTCGCAGGCAGTGCGAAGACGACGA 80970 Query 7379 AGGGCACGCGGGTTACCGGAAATATCT--------------------------------- 7405 | || || |||||| ||||| |||| Sbjct 80969 ACAGCGCGAGGGTTAGAGGAAAGATCTATTCATCGTGTCATTACTTTGAACAACACAGTG 80910 Query 7406 -----------------TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGA 7448 ||||| | || || || ||||| | | ||||| | || Sbjct 80909 GTATAAATACCATACCTTTCTTGTTCTTGCGCTTGAACTCCTGAACAAAGTGATTGACGA 80850 Query 7449 GTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAA 7508 | | ||| |||||||||||||||||||| ||||| || ||||| || ||||| || | Sbjct 80849 GACGGTTATCAAAATCTTCACCACCCAAGTGGGTATCACCGGCGGTAGCCTTGACCTCGA 80790 Query 7509 AGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAA 7568 | |||||| |||| ||| | | | ||||||||||| || || ||||| || || || | Sbjct 80789 AAATACCTTCTTCGATGGTGAGAAGTGAAACATCAAAGGTTCCTCCACCAAGATCGAAGA 80730 Query 7569 TGAGTACGTT-CG-TATC--GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCC 7624 | | || || || | || ||| | ||||| ||||| || || || || || || Sbjct 80729 TCAAAACATTGCGCTCTCCGGTCACC----TTCTTGTCGAGGCCATAAGCAATGGCGGCA 80674 Query 7625 GCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTC 7684 || ||||| ||||| || ||||| || ||| || || | ||| || | || || || Sbjct 80673 GCTGTTGGCTCATTGATGATACGGAGGACGTTGAGACCGGAAATGGTGCCAGCGTCCTTG 80614 Query 7685 GTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACT 7744 || ||||| || ||||| ||||| |||||||| || || || ||||| |||| | | Sbjct 80613 GTAGCTTGACGCTGCGAGTCGTTGAAGTAGGCGGGAACGGTAACGACAGCGTTGTTTATG 80554 Query 7745 TTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATC 7804 || | ||||| || ||||| ||| | || ||||| ||| |||||||| || ||||| Sbjct 80553 GTCGTTCCGAGGTAAGATTCAGCGGTCTCCTTCATCTTGAGGAGAACCATGGACGAAATT 80494 Query 7805 TCTTC 7809 ||||| Sbjct 80493 TCTTC 80489 >seq654 Length=437428 Score = 86.0 bits (94), Expect = 8e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 105838 CCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCG 105897 ||||| || ||||| ||| ||||| |||||| | || | ||||| |||||||| Sbjct 48188 CCAATGCCTCCAGCAGTCTTGCTGATCATCGCACATTGCTTGAGGGTATCATAAATACCA 48247 Query 105898 TCGATACTATCTTCCTTATTCGCAATCA-GGAAACACGATGACATTTGTGGTCTGGGTGT 105956 || || ||| ||||| | |||| || |||||||||| | |||||| ||||| Sbjct 48248 TCAATTGAATCATCCTTCAT-GCAAACAAGGAAACACGAGCTGAGTTGTGGATGAGGTGT 48306 Query 105957 ACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTA 106016 |||||||||||| ||||| || | || || |||| | | | || | | | || Sbjct 48307 ACCAGCATTGAAGAGAGTAGGCGAAGCGTGTGTGAAGTAGCGCTCAGACATCAGATTATA 48366 Query 106017 TGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCAT 106070 || || | ||| | ||||| || | |||||||| |||| ||||| ||||| Sbjct 48367 CGTCTCTAAGACACGTTCAATGTCATCGCCATGAATGCCAACTGCGACACGCAT 48420 >seq470 Length=339658 Score = 86.0 bits (94), Expect = 8e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 ||| | |||||| || | ||| ||||| || ||||| || || | ||| ||| | || Sbjct 299576 ATCCAAACCGTAAGCAAGAGCAGCCGCAGTAGGTTCGTTGATCACACGTAGAACATCAAG 299635 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||||||||| | | ||||| || |||||||||||||| | ||| || ||||| || || Sbjct 299636 GCCAGCAATTTGTCCGGCATCCTTGGTCGCTTGTCGTTGGGCATCATTGAAGTAAGCAGG 299695 Query 7720 GACCGTTACGACCGC 7734 || || ||||| || Sbjct 299696 CACGGTAACGACAGC 299710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635114262061400