Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08-
10] 2,335 sequences; 67,296,805 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq510 239 6e-58
seq654 86.0 8e-12
seq470 86.0 8e-12
>seq510
Length=242540
Score = 239 bits (264), Expect = 6e-58
Identities = 554/845 (66%), Gaps = 64/845 (8%)
Strand=Plus/Minus
Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081
|| || || || || | || || || || || ||||| |||||||| || | || ||
Sbjct 81326 ATAGCAGCCTGAACAGCAGCTCCATAAGCAACGGCCTCGTCGGGGTTGATGCTCTTGTTG 81267
Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141
| || || ||||| || | || || | | | ||| || || || || ||
Sbjct 81266 GGCTCCTTGCCGTTGAAGAAGTCGGACACAAGCTTGACAATACGAGGAATACGCGTAGAA 81207
Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201
|||||||| | ||| || || | ||| || | ||||||||||| || || || ||
Sbjct 81206 CCACCGACAAGAACAATCTCGTGCACATTAGCCTTATCGATCTTGGAATCACGGAGAACC 81147
Query 7202 TTTTCGACAGGTTCCA---TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGT 7258
|| ||||| || || | ||| ||||| | |||| |||| || || || ||
Sbjct 81146 TTCTCGACCGGCTCGAGCGTACCG---CGGAAGAGGTCCTGGCACAACTCTTCGAACCGA 81090
Query 7259 GCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTT 7318
|||||||||| ||| || |||||||||| ||| ||||| | ||| |||||||||||||
Sbjct 81089 GCACGGGTAAGGGAAGTGTAGAAATCAATGCCCTCGTAGAGCGAGTCAATTTCAATGGAA 81030
Query 7319 GTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGA 7378
|| || || | || || | || ||||| || ||||| || || || || | |||||||
Sbjct 81029 GTCTGAGCGGCAGAGGAAAGGGTGCGCTTGGCACGCTCGCAGGCAGTGCGAAGACGACGA 80970
Query 7379 AGGGCACGCGGGTTACCGGAAATATCT--------------------------------- 7405
| || || |||||| ||||| ||||
Sbjct 80969 ACAGCGCGAGGGTTAGAGGAAAGATCTATTCATCGTGTCATTACTTTGAACAACACAGTG 80910
Query 7406 -----------------TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGA 7448
||||| | || || || ||||| | | ||||| | ||
Sbjct 80909 GTATAAATACCATACCTTTCTTGTTCTTGCGCTTGAACTCCTGAACAAAGTGATTGACGA 80850
Query 7449 GTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAA 7508
| | ||| |||||||||||||||||||| ||||| || ||||| || ||||| || |
Sbjct 80849 GACGGTTATCAAAATCTTCACCACCCAAGTGGGTATCACCGGCGGTAGCCTTGACCTCGA 80790
Query 7509 AGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAA 7568
| |||||| |||| ||| | | | ||||||||||| || || ||||| || || || |
Sbjct 80789 AAATACCTTCTTCGATGGTGAGAAGTGAAACATCAAAGGTTCCTCCACCAAGATCGAAGA 80730
Query 7569 TGAGTACGTT-CG-TATC--GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCC 7624
| | || || || | || ||| | ||||| ||||| || || || || || ||
Sbjct 80729 TCAAAACATTGCGCTCTCCGGTCACC----TTCTTGTCGAGGCCATAAGCAATGGCGGCA 80674
Query 7625 GCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTC 7684
|| ||||| ||||| || ||||| || ||| || || | ||| || | || || ||
Sbjct 80673 GCTGTTGGCTCATTGATGATACGGAGGACGTTGAGACCGGAAATGGTGCCAGCGTCCTTG 80614
Query 7685 GTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACT 7744
|| ||||| || ||||| ||||| |||||||| || || || ||||| |||| | |
Sbjct 80613 GTAGCTTGACGCTGCGAGTCGTTGAAGTAGGCGGGAACGGTAACGACAGCGTTGTTTATG 80554
Query 7745 TTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATC 7804
|| | ||||| || ||||| ||| | || ||||| ||| |||||||| || |||||
Sbjct 80553 GTCGTTCCGAGGTAAGATTCAGCGGTCTCCTTCATCTTGAGGAGAACCATGGACGAAATT 80494
Query 7805 TCTTC 7809
|||||
Sbjct 80493 TCTTC 80489
>seq654
Length=437428
Score = 86.0 bits (94), Expect = 8e-12
Identities = 161/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 105838 CCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCG 105897
||||| || ||||| ||| ||||| |||||| | || | ||||| ||||||||
Sbjct 48188 CCAATGCCTCCAGCAGTCTTGCTGATCATCGCACATTGCTTGAGGGTATCATAAATACCA 48247
Query 105898 TCGATACTATCTTCCTTATTCGCAATCA-GGAAACACGATGACATTTGTGGTCTGGGTGT 105956
|| || ||| ||||| | |||| || |||||||||| | |||||| |||||
Sbjct 48248 TCAATTGAATCATCCTTCAT-GCAAACAAGGAAACACGAGCTGAGTTGTGGATGAGGTGT 48306
Query 105957 ACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTA 106016
|||||||||||| ||||| || | || || |||| | | | || | | | ||
Sbjct 48307 ACCAGCATTGAAGAGAGTAGGCGAAGCGTGTGTGAAGTAGCGCTCAGACATCAGATTATA 48366
Query 106017 TGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCAT 106070
|| || | ||| | ||||| || | |||||||| |||| ||||| |||||
Sbjct 48367 CGTCTCTAAGACACGTTCAATGTCATCGCCATGAATGCCAACTGCGACACGCAT 48420
>seq470
Length=339658
Score = 86.0 bits (94), Expect = 8e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659
||| | |||||| || | ||| ||||| || ||||| || || | ||| ||| | ||
Sbjct 299576 ATCCAAACCGTAAGCAAGAGCAGCCGCAGTAGGTTCGTTGATCACACGTAGAACATCAAG 299635
Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719
||||||||| | | ||||| || |||||||||||||| | ||| || ||||| || ||
Sbjct 299636 GCCAGCAATTTGTCCGGCATCCTTGGTCGCTTGTCGTTGGGCATCATTGAAGTAAGCAGG 299695
Query 7720 GACCGTTACGACCGC 7734
|| || ||||| ||
Sbjct 299696 CACGGTAACGACAGC 299710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635114262061400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |