Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq120 143 3e-29 seq654 132 6e-26 seq444 120 4e-22 >seq120 Length=370717 Score = 143 bits (158), Expect = 3e-29 Identities = 351/523 (67%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAG--ACTC-TAAAT 101873 ||||| ||||| ||| | ||||| || ||||| | |||||||||| || | | ||| Sbjct 288071 TGGACGGCTGAGGAGATGGATCTTTCCAAGGACCTTTACGATTGGAATGAACGCCTCAAT 288012 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || ||||| | || || || | |||| || ||||||| |||||||| ||| Sbjct 288011 GACAATGAGCGCCACTTTATCTCGCACGTTTTGGCTTTTTTTGCTGCTTCCGATGGCATT 287952 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCT 101993 || || || | | ||| | |||| || || | ||||||| | | | Sbjct 287951 GTCAACGAAAACCTTGTCGAGCGCTTCTCCAATGAAGTCCAGGCAGCTGAAGCTCGCTGT 287892 Query 101994 TTCTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCAT 102052 ||||||| | ||| |||| ||| ||| | ||| || ||||| | || || Sbjct 287891 TTCTATGGCTTTCAGA-TCATGATGGAAAACATTCATTCCGAAACATATTCTCTCCTTAT 287833 Query 102053 AGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGT 102112 ||||| || || ||||| |||||| || | |||||||| |||||| |||| | Sbjct 287832 AGACACTTACATCAAGGACCAAGCTGAGCGCGAGTACCTCTTTGATGCCATCGAAACCAT 287773 Query 102113 TCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTCGCG 102169 ||| |||||| || ||| || || |||||| |||||||| | ||| | || || Sbjct 287772 TCCCTGTATTAAACGGAAGGCTGAATGGGCTCTGAAGTGGATCTCTGACAAGAACTC--- 287716 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 | | || || || || | | ||||||||| ||| || || ||||||||||| || || Sbjct 287715 TACTTTCGCCGAACGGTTAGTTGCATTTGCGGCTGTGGAAGGCATCTTCTTCTCAGGCTC 287656 Query 102230 CTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 ||| ||| | || | ||||| ||||| || ||||||||||| || | ||||| | Sbjct 287655 CTT-TGCATCAATCTTCTGGCTAAAGAAACGTGGTCTCATGCCCGGCTTGACTTTCTCAA 287597 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||||||| ||||| ||||| | ||| || ||||| Sbjct 287596 ACGAGCTTATCAGCCGTGATGAGGGTATGCACACCGACTTTGC 287554 >seq654 Length=437428 Score = 132 bits (146), Expect = 6e-26 Identities = 316/473 (67%), Gaps = 6/473 (1%) Strand=Plus/Minus Query 112506 AAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAAT 112565 ||||||||||| ||||| || |||| | | || | || | | |||||| ||| Sbjct 47389 AAACTCCACGATGTTACCAAGGTTGTCGCTTACAATTTGAATCGTATCATTGATGTCAAT 47330 Query 112566 TTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625 | |||||| || || ||| || || ||| | |||||||| |||||| ||||| Sbjct 47329 TATTACCCTGTCCCCGAAGCCCGTCGCTCGAACATGCGTCACCGTCCTATTGGTGTCGGT 47270 Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCG 112685 || ||||||||||| |||| ||||| ||| | | | || || || | || Sbjct 47269 GTGCAAGGTCTCGCTGATGCTTTCATGATTTTGCACATGCCCTTCGACTCTCCGGCCGCC 47210 Query 112686 AAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCG 112745 ||||| |||| | || || ||||| || || ||||| ||| | ||||| ||| | Sbjct 47209 AAGGAGCTCAACATTCAGATCTTCGAGACCATCTACCACGCGGCTTTGGAGGCTAGTACC 47150 Query 112746 GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG 112805 ||| |||| ||| || || || ||||| |||| ||||| ||| || || ||||| Sbjct 47149 GAGATGGCGGAGAAAGAAGGACCGTATGAGACCTACCAGGGTAGTCCTGCGTCGCAAGGA 47090 Query 112806 GTGCTTCAATTTGATATGTGGGAAGGTGAGACCA--AGCTTCACTACGACTGGGACGCTC 112863 |||| || || || | |||| || | ||| |||| | ||||||| | | | Sbjct 47089 TTGCTCCAGTTCGACCTTTGGGGAGTTACCCCCACCGGCTT--GTGGGACTGGGCCTCGC 47032 Query 112864 TCAAGGAACGCATC-AAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCA 112922 ||||||| ||| | || | |||||||| || || || || || ||||| Sbjct 47031 TCAAGGAGAAGATCGCACGA-ACTGGTCTTCGCAATTCCCTGCTGTGTGCTCCTATGCCC 46973 Query 112923 ACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 || ||||| ||| || ||||||||| ||||| ||||| ||||||||||| Sbjct 46972 ACTGCCTCGACCAGTCAGATCTTGGGTTTCAATGAGTGCTTCGAACCCTACAC 46920 Score = 95.1 bits (104), Expect = 2e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 112124 CATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGG 112183 ||||||| | ||||||| | |||| | ||| | || || || || || | || || || Sbjct 47816 CATGAAGCGCGTTGAGGCGGGTGGTGACTGGCCACTTTTCTGCCCCAACGAAGCCCCAGG 47757 Query 112184 TCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAG 112243 || | |||| || || |||||||| ||||| | ||| ||||||||| | |||| Sbjct 47756 ACTTGCTGATGTTCATGGCGAAGAGTTTGAGGCCCTGTTCACGAAGTACGAGAACGAAAA 47697 Query 112244 TCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAAC 112303 || || | ||| || || ||| | | ||| | || |||||| || | |||| Sbjct 47696 ACGTGCTAAGAAGACTGTTCCTGCTCAGAAACTTTGGTATGCGATTCTCGAGGCCCAAAT 47637 Query 112304 CGAGACTGGTACACCATATATGCTTTACAAAGACGCC 112340 ||||||||| ||||| |||||||||||| || ||| Sbjct 47636 CGAGACTGGAGGACCATTTATGCTTTACAAGGATGCC 47600 >seq444 Length=201600 Score = 120 bits (132), Expect = 4e-22 Identities = 331/498 (66%), Gaps = 17/498 (3%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || |||||||| || || || | ||| || ||| |||| ||| |||||||| | Sbjct 10777 CGGTCAAAGCGCCCAGGTCGCATGAGAGCAGGATCGAGGACATCCGGCCGATTCGTCCCT 10718 Query 15945 GCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 || | || || ||| | || | || ||||||||||||||||| || ||||| ||| Sbjct 10717 GCCAACACCACGATATGTTCTTTGGTACCAAAACCATCCATCTCTACCAGCAGCTGATTA 10658 Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCA---TACCACCAGCACTGCGTTGCTTTCCC 16061 | || ||| |||||||||||| | | | || || ||| |||||| Sbjct 10657 AGTGTGGATTCGCGTTCATCATTCCCACCGAAGTTGCCTCCCTTTGAGCGGGACTTTCCA 10598 Query 16062 ACGGCATCAATCTCATCAATGAAGACGATGCATGGT---TGATTTT-CGCGAGCGACTTC 16117 | || || || ||||||| ||| | |||||| || || |||| ||| || | | Sbjct 10597 ATAGCGTCGATTTCATCAACGAAAATGATGCAAGGAGCGTGCTTTTTCGCT---GA-TGC 10542 Query 16118 AAAGAGATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTGCG 16175 ||| || ||||| ||| |||| | || |||||||| ||||| || || || | | Sbjct 10541 AAAAAGGTCCCG--CACCCTTGAAGAACCAACACCAACGAACATTTCGACGAACTCGGAT 10484 Query 16176 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 | || ||| | ||| || ||| | ||| |||||| | ||| |||| |||||| Sbjct 10483 CCAGAGACAGAC-AGGAAAGGAACAGAGGCTTCGCCCGCAGTTGCTTTCGCGATAAGAGT 10425 Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCC 16294 |||||| ||||| || |||| ||||| |||||||| || ||||||||||| || Sbjct 10424 CTTACCAGTACCCGGGGGCCCCGAGAGGATAGCACCTCGCGGTATCTTGGCGCCCAGTCG 10365 Query 16295 AAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGC 16354 ||| || | |||| ||| || || | || | ||| | ||| || || || | Sbjct 10364 CTCGTACTTCGCTGGTTCCTTCAGGAATTTGACGAACTCCATAATTTCCTCCTTTGCCTC 10305 Query 16355 GTCAATCCCCTCAACATC 16372 ||| || || ||||||| Sbjct 10304 GTCCATTCCTGCAACATC 10287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620724282081200