Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq666 159 8e-34 seq641 159 8e-34 >seq666 Length=522490 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||| || ||||| || || ||||||||||| || | ||||| | |||||||| | Sbjct 282540 CAAGGTGGAGGGTGGATTCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAA 282599 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 | ||||| || |||||||| | ||||| || || ||||| || ||||| ||||| |||| Sbjct 282600 GTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAA 282659 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||||||| ||||| ||||| || ||| || ||||| || | ||||||| Sbjct 282660 TCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTC 282719 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||| ||| || || || | |||||| Sbjct 282720 CTGTCAGAGTCTTGACAAAAATTTGCAT 282747 Score = 143 bits (158), Expect = 6e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || ||||| || || || || |||||||||||||| | ||| || | |||||||||||| Sbjct 282820 AGATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGC 282879 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 || || || |||||||| | ||||| ||||| || ||||| ||||| || ||||| || Sbjct 282880 TGTTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATC 282939 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||||| || || ||||| || || ||||| |||||||| | ||||| || Sbjct 282940 TTGGTTTTGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCA 282999 Query 195115 GTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || ||||| || | |||||| Sbjct 283000 GTCAAGGTCTTTACAAAAATCTGCATT 283026 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || | ||||| || || ||||| || || |||| ||| || | ||||||||| Sbjct 283045 ACAAGATGCAACGTGGATTCCTTCTGAATGTTATAGTCGGAAAGCGTGCGGCCATCTTCG 283104 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 || || ||||| || ||||| || ||||| ||||| |||||||| Sbjct 283105 AGTTGTTTACCAGCAAAGATGAGACGTTGCTGGTCGGGAGGAAT 283148 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCA 195096 ||||||||||||||||| || ||||| || || |||||||| ||| || || ||| Sbjct 283201 CCTTCTTTGTCTTGAATCTTGGCTTTGACATTATCGATGGTGTCGGAAGACTCAACCTCA 283260 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | |||||||| ||||| ||||| || || | |||||| Sbjct 283261 AGGGTGATGGTCTTTCCAGTCAAGGTTTTCACAAAGATTTGCAT 283304 >seq641 Length=242067 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || || || || || || || || ||||| ||||||| || |||| |||||| || || Sbjct 74294 AGATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGT 74235 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || ||||||||||| |||||||| || |||||||| || || ||||||||||| Sbjct 74234 TGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATC 74175 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||| ||||| || || ||||| ||| ||| ||||||||||| | ||||| || Sbjct 74174 TTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCC 74115 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| || || || | ||||| Sbjct 74114 GTCAAAGTCTTGACAAAGATCTGCAT 74089 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| ||||| ||||| || || ||||| |||| ||||| | ||||| ||| Sbjct 74069 ACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCCTCG 74010 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || ||||||||||| || |||||||| || ||||| || || ||||| || || Sbjct 74009 AGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCCTGG 73950 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||||||| || ||||| || || || || |||||||| | ||||| Sbjct 73949 ATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGTCTTG 73890 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||| || ||||| | ||||| Sbjct 73889 CCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 Score = 118 bits (130), Expect = 2e-21 Identities = 89/105 (85%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || |||||||| |||||||| || || |||||||| | || || ||||||||||| Sbjct 73569 AACTAGATGAAGAGTAGACTCTTTCTGGATGTTGTAATCAGAGAGCGTCCTCCCATCTTC 73510 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 ||||||||| || || |||||||| ||||||||||| |||||||| Sbjct 73509 GAGCTGCTTCCCAGCAAAGATAAGGCGTTGTTGGTCGGGAGGAAT 73465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109448407430945