Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq666 100 2e-15 seq470 100 2e-15 seq641 98.7 8e-15 seq510 95.1 1e-13 >seq666 Length=522490 Score = 100 bits (110), Expect = 2e-15 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 563269 AGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGT 563328 |||||||||||| ||| || |||||||||||||| || || | |||||| || Sbjct 282820 AGATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGC 282879 Query 563329 TGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATT 563388 ||||||||||| || || | | |||||| ||||| ||||| ||||| |||||||| || Sbjct 282880 TGTTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATC 282939 Query 563389 TTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACC 563447 || ||| || || || ||||| | | || | || || || || | || || || Sbjct 282940 TTGGTTTTGACATTGTCGATGGTATCGGAG-GACTCCACCTCAAGGGTGATGGTCTTCCC 282998 Query 563448 AGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| | || || || ||||| ||||| Sbjct 282999 AGTCAAGGTCTTTACAAAAATCTGCAT 283025 Score = 95.1 bits (104), Expect = 1e-13 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || |||||||| || || ||||| ||| |||||||||| ||||| | Sbjct 282249 GAGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCG 282308 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 || ||||| ||||| |||||||| || | | |||||| || || || || ||||| Sbjct 282309 GCCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGGATGCCTTC 282368 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAG 563434 || || |||||||| || || |||||||| || | || | | ||||| | Sbjct 282369 CTTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGAC-GATTCAACCTCGAGCG 282427 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| || || || || | || || ||||||||||||||| Sbjct 282428 TAATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCATA 282468 >seq470 Length=339658 Score = 100 bits (110), Expect = 2e-15 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | || || || || || || ||||| | ||||| ||||| || || |||| Sbjct 299712 ATGCTGTCGTTACCGTGCCTGCTTACTTCAATGATGCCCAACGACAAGCGACCAAGGATG 299653 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | |||| |||||||| ||| ||||||| ||| | ||||| ||||||||||| ||||| | Sbjct 299652 CCGGACAAATTGCTGGCCTTGATGTTCTACGTGTGATCAACGAACCTACTGCGGCTGCTC 299593 Query 550518 TTGCATATGG 550527 |||| || || Sbjct 299592 TTGCTTACGG 299583 >seq641 Length=242067 Score = 98.7 bits (108), Expect = 8e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| || || || ||||||||||| |||||| || ||||| || | ||||| | Sbjct 74079 GAGGCGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCG 74020 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 | ||| || |||||||| || || || || || | ||| ||||||||||| || || || Sbjct 74019 TCCATCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTC 73960 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 |||||| || ||||| || || || || ||||| | ||| | | || || | Sbjct 73959 TTTATCCTGGATTTTAGCCTTGACGTTGTCGATGGTATCTG-ATGACTCGACCTCAAGGG 73901 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | ||| || ||||| ||||| || ||||| || |||||| Sbjct 73900 TGATAGTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCATA 73860 >seq510 Length=242540 Score = 95.1 bits (104), Expect = 1e-13 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 || |||||||||||||||||||| || || ||| | |||||||| ||||||||||||||| Sbjct 81628 GGCATTCCTCCTGCTCCTCGTGGTGTTCCCCAAGTGGAAGTTACATTCGATATCGATGCC 81687 Query 552567 AATGGAATTTTGAATGTGACTGCTT 552591 ||||| ||| | || || |||||| Sbjct 81688 AATGGCATTCTTAACGTTTCTGCTT 81712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029172514669150