Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq666 105 5e-18 >seq666 Length=522490 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || | ||| ||||| |||||| ||||| ||||||||||| ||| | || Sbjct 282250 AGACGCAGAACAAGATGGAGCGTCGACTCTTTCTGAATGTTGTAATCAGAAAGAGTGCGG 282309 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||| || |||||||| |||| || || || || | ||| | ||| ||| Sbjct 282310 CCGTCCTCAAGCTGTTTCCCGGCAAAGATCAAGCGTTGCTGGTCGGGGGGGATGCCTTCC 282369 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || || || | | | | || |||| || ||||| | |||| Sbjct 282370 TTGTCCTGAATTTTCGCCTTGACGTTATCAATTGTGTCCGACGATTCAACCTCGAGCGTA 282429 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || |||||||| || || || ||||| ||||| Sbjct 282430 ATGGTCTTCCCCGTCAACGTCTTGACGAAAATTTGCAT 282467 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||||||||||||||| || | ||| | || || | ||| || ||||| || Sbjct 282835 TCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCTTCGAGCTGTTTTCCGGCGAAG 282894 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| || || || || | ||||| || ||||| || ||||| ||| ||| Sbjct 282895 ATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCTTGGATCTTGGTTTTGACATTG 282954 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||||||||| | || || || || || ||||| || |||||| Sbjct 282955 TCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTCTTCCCAGTCAAGGTCTTTACA 283014 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 283015 AAAATCTGCAT 283025 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 48559 CCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCA 48618 ||| ||| || |||||||| || || || || || || || || | | |||| || | Sbjct 282032 CCAGATGCAGGGTGCTCTCCTTCTGTATGTTATAGTCGGAAAGCGTCCTCCCGTCTTCGA 282091 Query 48619 ACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAA 48678 ||||| || ||||| || || || || || || | |||| || |||||||| || Sbjct 282092 GTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTGTCCTGAA 282151 Query 48679 TCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTC 48738 |||| ||| || | | | || |||| |||||| |||| ||||||||| |||| Sbjct 282152 TCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAACGTAATCGTCTTTC 282211 Query 48739 CCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | || | || || |||||||||||||| Sbjct 282212 CGGTGAGCGTCTTCACAAAAATCTGCAT 282239 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||||||||| || || ||| | ||| | || || | ||||| ||||| || Sbjct 282557 TCCTTCTGAATATTGTAGTCCGAGAGAGTGCGACCATCTTCAAGTTGCTTGCCGGCGAAG 282616 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| || || ||||| | || | || |||||||| |||||| || || | Sbjct 282617 ATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTTGTCCTGAATCTTGGCCTTGACGTTA 282676 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || |||| || ||||| | || || || ||||| |||| ||| || ||| Sbjct 282677 TCAATAGTGTCGGACGATTCAACCTCAAGAGTGATGGTCTTTCCTGTCAGAGTCTTGACA 282736 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 282737 AAAATTTGCAT 282747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380926759349205