Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq120 188 1e-42 >seq120 Length=370717 Score = 188 bits (208), Expect = 1e-42 Identities = 381/565 (67%), Gaps = 3/565 (1%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | ||| |||||||| |||||| || || || |||||||| ||| |||| |||| Sbjct 287543 AGAGAAGGCATGCAAAGTCGGTGTGCATACCCTCATCACGGCTGATAAGCTCGTTTGAGA 287602 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | | || ||||||| || | | || |||||||| |||| || || ||||| | Sbjct 287603 AAGTCAAGCCGGGCATGAGACCACGTTTCTTTAGCCAGAAGATTGATGCAAAGGAGCCTG 287662 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 ||||||||||||| ||||| ||||| || || | || || |||||| || ||||| Sbjct 287663 AGAAGAAGATGCCTTCCACAGCCGCAAATGCAACTAACCGTTCGGCGAAAGTAGAGTTCT 287722 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| |||||||| || ||||| || |||||| || || || || || || || | Sbjct 287723 TGTCAGAGATCCACTTCAGAGCCCATTCAGCCTTCCGTTTAATACAGGGAATGGTTTCGA 287782 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422 |||| ||||| | || || |||| || |||| | || || | || | Sbjct 287783 TGGCATCAAAGAGGTACTCGCGCTCAGCTTGGTCCTTGATGTAAGTGTCTATAAGGAGAG 287842 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 || | || || || | || || || |||||| || || ||||| | || | Sbjct 287843 AATATGTTTCGGAATGAATGTTTTCCATCATGATCTGAAAGCCATAGAAACAGCGAGCTT 287902 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 || |||| ||||| ||||||| | ||| | || || || ||||| || ||||| | Sbjct 287903 CAGCTGCCTGGACTTCATTGGAGAAGCGCTCGACAAGGTTTTCGTTGACAATGCCATCGG 287962 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA---GAG 48599 |||||||||| || || | || || | || |||||||| |||| ||| | Sbjct 287963 AAGCAGCAAAAAAAGCCAAAACGTGCGAGATAAAGTGGCGCTCATTGTCATTGAGGCGTT 288022 Query 48600 CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGA 48659 ||||||| | | | ||| ||| || |||| || || | ||||||||||| || Sbjct 288023 CATTCCAATCGTAAAGGTCCTTGGAAAGATCCATCTCCTCAGCCGTCCAGAAGGATGCTT 288082 Query 48660 GTGCTTTTTTGTACATGCCCCATAT 48684 ||| ||||||||||| |||||| Sbjct 288083 CTGCCTTTTTGTACATTTGCCATAT 288107 Score = 178 bits (196), Expect = 2e-39 Identities = 370/547 (68%), Gaps = 7/547 (1%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || ||||| ||| |||| | ||||||||| || |||||||| | |||||||| |||| Sbjct 289771 CATGCAAAATCCGTGTGAAGGCCTTCGTCGCGACTGATGAGTTCATTGGAGAAAGTGAGA 289712 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || | || |||| ||| ||||| || || || || |||||||| || Sbjct 289711 CCAGGCATCAAACCACGCTTCTTGATCCAAAAAATAGCAGCAAAGGACCCAGAGAAAAAT 289652 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCG-AAAGAAGCGTTCTT-GTCTG 48308 || || || || || || || || || || |||| |||| | | || ||||| Sbjct 289651 ATTCCTTCTACAGCGGCAAAAGCAACAAG--TCGTTCCGCAAAGGTGGACTGTTGGTCTG 289594 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 | ||||| ||| |||||||| || || ||||| |||| || || || ||||| Sbjct 289593 ATATCCATCTAAGAGCCCAGTCAGCTTTACGCTTGACACATGAGATGGTTTCGATGGCGT 289534 Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 ||| || | || | || ||| ||| | ||||| || || | ||| Sbjct 289533 CGAATAGATGTTTCCGTTCTTCTGGATCCTTGATGTAGGTGTCGATAAGTAGAGAGTAAG 289474 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | || ||||| ||||| || || || ||||| ||||||||| || || ||| | Sbjct 289473 TTTCCGAGTGAACATTTTCCATCATTATTTGGAAGCCGTAGAAGCACCGTGCTTCAGCTA 289414 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||| | ||| ||||||||| || || || |||||||| || || || || ||||||| Sbjct 289413 CCTGAATTTCACTGGAGAATCGTTCAAGGAGGTTCTCATTCACAATGCCGTCGGAAGCAG 289354 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATTCC 48605 ||||||| || ||||| || | ||||| || ||| || | |||| | ||||| Sbjct 289353 CAAAGAATGCGAGGACGTGAGAGATGAAATACCGTTCGCTGGAGTTGAGCTTATGATTCC 289294 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 | || | || | || || || | ||| || | ||||| || ||||| |||| | Sbjct 289293 AATCCATGAGATCGTGGCAGAGATCTATTTCCTCTGCGGTCCAAAATGACGCCTGTGCCT 289234 Query 48666 TTTTGTA 48672 |||| || Sbjct 289233 TTTTATA 289227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931505610886400