Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq641 123 2e-22 seq666 96.9 2e-14 seq705 91.5 1e-12 seq510 86.0 4e-11 >seq641 Length=242067 Score = 123 bits (136), Expect = 2e-22 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 480567 AGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGT 480626 ||||| ||||| ||| || | ||||||||| | || |||| ||| |||||| Sbjct 74294 AGATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGT 74235 Query 480627 TGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATC 480686 ||||| ||||| || |||||||||||||||||||||||||| || ||||||||||||||| Sbjct 74234 TGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATC 74175 Query 480687 TTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCG 480746 || || || || || || |||| | | ||||||||| ||||| || || Sbjct 74174 TTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCC 74115 Query 480747 GTGAGAGTCTTAACGAAAATTTG 480769 || | |||||| || || || || Sbjct 74114 GTCAAAGTCTTGACAAAGATCTG 74092 >seq666 Length=522490 Score = 96.9 bits (106), Expect = 2e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||||||||||||||| || || || || | ||||| ||||| ||||| || |||||||| Sbjct 282592 ATCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGTTGCTGATCGGGAGGTATACCTTCCTT 282651 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736 ||| |||||||| ||||| |||||||| || | | | ||||| || || Sbjct 282652 GTCCTGAATCTTGGCCTTGACGTTATCAATAGTGTCGGACGATTCAACCTCAAGAGTGAT 282711 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| || |||||||| Sbjct 282712 GGTCTTTCCTGTCAGAGTCTTGACAAAAATTTG 282744 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| |||||||| || ||||| || || ||||| || ||||| ||||| ||||||||| Sbjct 282085 TCTTCGAGTTGCTTGCCCGCAAAGATTAGGCGTTGCTGGTCAGGCGGAATACCTTCCTTG 282144 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 || |||||||| ||| || ||||| || || | | | | || ||| ||||| Sbjct 282145 TCCTGAATCTTCGCTTTCACGTTGTCAATCGTGTCCGACGACTCCACTTCCAA-CGTAAT 282203 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||| ||||| || ||||| || Sbjct 282204 CGTCTTTCCGGTGAGCGTCTTCACAAAAATCTG 282236 >seq705 Length=115309 Score = 91.5 bits (100), Expect = 1e-12 Identities = 116/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 475998 CTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAG 476057 ||||||||||| | || ||| || || | |||||||||||| | ||||||| | Sbjct 92622 CTGATAATCAACCCACCGTATTGATTCAGGTTTTTGAAGGTGAACGTTCCCTCACTAAGG 92681 Query 476058 ATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTC 476117 | || ||| || |||| || | ||| || ||||||||||| || | || |||| Sbjct 92682 ACAACAACCTTCTCGGAAAGTTCGAGCTTTCGGGCATTCCTCCTGCGCCTCGCGGTGTTC 92741 Query 476118 CTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTAT 476157 ||||||| || || || || || |||||||| |||||||| Sbjct 92742 CTCAAATCGAGGTCACCTTCGAAATTGATGCCAATGGTAT 92781 >seq510 Length=242540 Score = 86.0 bits (94), Expect = 4e-11 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 476090 GGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCA 476149 || |||||||||||||| | || ||||| ||| | |||||||| || ||||| ||||| Sbjct 81628 GGCATTCCTCCTGCTCCTCGTGGTGTTCCCCAAGTGGAAGTTACATTCGATATCGATGCC 81687 Query 476150 AATGGTATTCTTAATGTTACTGCTT 476174 ||||| |||||||| ||| |||||| Sbjct 81688 AATGGCATTCTTAACGTTTCTGCTT 81712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268079040520580