Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq448 100 4e-16 >seq448 Length=220889 Score = 100 bits (110), Expect = 4e-16 Identities = 302/462 (65%), Gaps = 6/462 (1%) Strand=Plus/Plus Query 47863 TGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCA 47922 |||||||| ||||| | |||||||| || || || || || || || || || Sbjct 156923 TGTCCCCAATCACGCCGAGCATCAAGGTTCCCGAGGTACAAGCATGACTGTTTCCCGAGC 156982 Query 47923 GAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGA 47982 ||||| || ||| | | ||||| || ||||| || ||| |||||| | || Sbjct 156983 GAGATATCTGCAGCTGCACGCGATATCTTGCGCGTTACGAATGTTCGACCACGACGAGGG 157042 Query 47983 GATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTC 48042 || || || || || || ||| | || ||||||||||| || || || |||||||| Sbjct 157043 CTCTCGTGGTTGAATAGGATCCCATTGCACGCATACATTCCATACGACTCGCGATAGTTG 157102 Query 48043 TTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGT 48102 || |||||| | | ||||| || || || || ||||| || || || || ||| Sbjct 157103 ACGACGATCCAGAATGCGTAGAGCTTGGCGCAGCCGTACGGAGAGCGAGGGTAAAAGGGT 157162 Query 48103 GTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGA 48162 || ||||| | || || ||||| ||||| || || ||||| || || || || Sbjct 157163 GTCGTCTCGCTTTGCGGTGTCTCGACGACCTTTCCGTAGAGTTCGGATGTTGACGCCTGG 157222 Query 48163 TAGATACGAACCCTATCT-TCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGT 48221 |||| || | ||| | || | | || || ||||| || || | | || || Sbjct 157223 TAGAAGCGGA-TGTATTTCTCGAGCCCACAGGTGCGTACTGCATCGAGGAGACGAAGAGT 157281 Query 48222 GCCTATGGCATC--TGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGA 48279 || | | | || |||| || || || || | ||| || || || || || ||||| Sbjct 157282 ACCGAGGCCGTCGACGTCT--CCCGTGTATTCTGCCATTTCGAAAGAGACTTTGACATGT 157339 Query 48280 CTCTGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTGC 48321 ||| || |||||||| ||||| || |||||| || ||| Sbjct 157340 GACTGCGCACCAAGATTGTAAATTTCGGTTGGTTGCACTTGC 157381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665474975882200