Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq120 145 9e-30 seq654 143 3e-29 >seq120 Length=370717 Score = 145 bits (160), Expect = 9e-30 Identities = 355/527 (67%), Gaps = 21/527 (4%) Strand=Plus/Minus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAG--AC-CCTGAAT 64770 ||||| || || || | ||| | ||||| || ||| |||| ||||| || ||| ||| Sbjct 288071 TGGACGGCTGAGGAGATGGATCTTTCCAAGGACCTTTACGATTGGAATGAACGCCTCAAT 288012 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || ||||| | || || | || | |||| || ||||||| |||||||| ||| Sbjct 288011 GACAATGAGCGCCACTTTATCTCGCACGTTTTGGCTTTTTTTGCTGCTTCCGATGGCATT 287952 Query 64831 GTTTTTGAGAA---TATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGC 64887 || || || | || | | || | ||||||| ||| | ||||| ||| Sbjct 287951 GTCAACGAAAACCTTGTCGAGCGC---TTCTCCAATGAAGTCCAGGCAGCTGAAGCTCGC 287895 Query 64888 TCATTCTACGCATATCA-ATGCCATAATG-AAATGGTTCATGGCGAAACATATTCAAAAT 64945 | ||||| | | ||| || ||| ||| ||| ||||| |||||||||||| Sbjct 287894 TGTTTCTATGGCTTTCAGAT--CATGATGGAAAACATTCATTCCGAAACATATTCTCTCC 287837 Query 64946 TGATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAA 65005 | || |||| ||||| ||||| | |||| || | | ||||| |||||| ||| Sbjct 287836 TTATAGACACTTACATCAAGGACCAAGCTGAGCGCGAGTACCTCTTTGATGCCATCGAAA 287777 Query 65006 CTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACAAAGT 65062 | | || |||||| | |||||| ||||||| |||| ||| | ||||| || | Sbjct 287776 CCATTCCCTGTATTAAACGGAAGGCTGAATGGGCTCTGAAGTGGATCTCTGACAAGAACT 287717 Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 || | |||||||| || | |||| |||||| |||||| || ||||||||||| | Sbjct 287716 CTA---CTTTCGCCGAACGGTTAGTTGCATTTGCGGCTGTGGAAGGCATCTTCTTCTCAG 287660 Query 65123 GGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTC 65181 | || || ||| | || | ||| | ||||| || ||||||||||| ||| | ||| Sbjct 287659 GCTCCTT-TGCATCAATCTTCTGGCTAAAGAAACGTGGTCTCATGCCCGGCTTGACTTTC 287601 Query 65182 TCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 ||||| || ||||| ||| ||||||||| | ||| || ||||| Sbjct 287600 TCAAACGAGCTTATCAGCCGTGATGAGGGTATGCACACCGACTTTGC 287554 Score = 125 bits (138), Expect = 9e-24 Identities = 297/440 (68%), Gaps = 14/440 (3%) Strand=Plus/Plus Query 64796 ACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAAT-AACAAT 64854 || |||| ||||||||||||| ||||| || ||||| |||||| || | ||| || Sbjct 289336 ACGTCCTCGCATTCTTTGCTGCTTCCGACGGCATTGTGAATGAGAACCTCCTTGAACGAT 289395 Query 64855 TTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCATTCTACGCATATCAATGCCATAAT 64914 | | | | |||| | ||| || ||||| || | ||||||| | ||| ||||| Sbjct 289396 TCTCCAG-TGAAATTCAGGTAGCTGAAGCACGGTGCTTCTACGGCTTCCAA----ATAAT 289450 Query 64915 ----GAAATGGTTCATGGCGAAACATATTCAAAATTGATTGACAAATACATTAAGGATGG 64970 |||| ||||| ||||| || || | | || |||| ||||| |||||| Sbjct 289451 GATGGAAAATGTTCACTCGGAAACTTACTCTCTACTTATCGACACCTACATCAAGGATCC 289510 Query 64971 ATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGC 65030 | ||| ||| || |||| || |||||| |||| | ||||| | || || || Sbjct 289511 AGAAGAACGGAAACATCTATTCGACGCCATCGAAACCATCTCATGTGTCAAGCGTAAAGC 289570 Query 65031 GAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTG 65089 | ||||| | | |||| | | | || || || | |||| || || || ||| ||| Sbjct 289571 TGACTGGGCTCTTAGATGGATATCAGACCAACAGTC-CACCTTTGCGGAACGACTTGTTG 289629 Query 65090 CGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTTG 65148 | ||||| ||| || || || || ||||| ||||| || ||| ||||||| |||| | Sbjct 289630 CTTTTGCCGCTGTAGAAGGAATATTTTTCTCTGGGTCCTT-TGCTGCTATTTTTTGGATC 289688 Query 65149 AAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAG 65208 |||||||| ||| | ||||| || || ||||| |||||||| || || || || Sbjct 289689 AAGAAGCGTGGTTTGATGCCTGGTCTCACTTTCTCCAATGAACTCATCAGTCGCGACGAA 289748 Query 65209 GGTCTCCACCAGGAGTTTGC 65228 || || ||| ||| ||||| Sbjct 289749 GGCCTTCACACGGATTTTGC 289768 >seq654 Length=437428 Score = 143 bits (158), Expect = 3e-29 Identities = 410/624 (66%), Gaps = 10/624 (2%) Strand=Plus/Minus Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||||||||| | || || |||||| || || || ||||||||||| | |||||| Sbjct 47533 AACCAAAAGAACCTTGGGACCATCAAGTCTTCTAACCTGTGCACGGAAATCATTGAGTAC 47474 Query 76016 ACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075 | ||||| || || || ||||||||||| || |||||||||| || | || Sbjct 47473 TCGTCACCAGATGAAACTGCCGTCTGCAATTTGGCTTCTCTCGCCCTTCCTTCGTTTATC 47414 Query 76076 AATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACC 76135 || ||| | || | ||||| | ||||| || || | || ||| |||| | Sbjct 47413 AA-GAATGGTGTC-----TATGATTTCCAGAAACTCCACGATGTTACCAAGGTTGTCGCT 47360 Query 76136 AAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCT 76195 | ||| | || || ||||||| |||| ||| || || || || || Sbjct 47359 TACAATTTGAATCGTATCATTGATGTCAATTATTACCCTGTCCCCGAAGCCCGTCGCTCG 47300 Query 76196 AATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTT 76254 || ||||| ||| | ||||||||| | ||||| ||||||||||| |||| || || || Sbjct 47299 AACATGCGTCACCGTCCTATTGGTGTCGGTGTGCAAGGTCTCGCTGATGCTTTCATGATT 47240 Query 76255 GTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAAC 76314 ||| | | | || || || | ||||||||| | || || ||||| || || Sbjct 47239 TTGCACATGC-CCTTCGACTCTCCGGCCGCCAAGGAGCTCAACATTCAGATCTTCGAGAC 47181 Query 76315 CATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGA 76374 ||| || ||||| | ||||||| ||| || |||| || |||| | ||||| Sbjct 47180 CATCTACCACGCGGCTTTGGAGGCTAGTACCGAGATGGCGGAGAAAGAAGGACCGTATGA 47121 Query 76375 GACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGA 76434 ||| | ||||| ||| ||||| ||||| |||| ||||| || | |||| || | Sbjct 47120 GACCTACCAGGGTAGTCCTGCGTCGCAAGGATTGCTCCAGTTCGACCTTTGGGGAGTTAC 47061 Query 76435 AACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATC-AAGGAGAAGGGTCTTC 76493 ||| | | ||||||| |||||||| ||| | || | ||||||| Sbjct 47060 CCCCACCGGCTTGTGGGACTGGGCCTCGCTCAAGGAGAAGATCGCACGA-ACTGGTCTTC 47002 Query 76494 GTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATA 76553 | || || || || || ||||| || ||||| ||| || ||||||||| | Sbjct 47001 GCAATTCCCTGCTGTGTGCTCCTATGCCCACTGCCTCGACCAGTCAGATCTTGGGTTTCA 46942 Query 76554 ATGAATGCTTTGAACCATACACAA 76577 |||| ||||| ||||| ||||||| Sbjct 46941 ATGAGTGCTTCGAACCCTACACAA 46918 Score = 102 bits (112), Expect = 1e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 75724 CATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGG 75783 ||||||||| ||||||| ||||||| | ||| | |||||||| || || | || ||||| Sbjct 47816 CATGAAGCGCGTTGAGGCGGGTGGTGACTGGCCACTTTTCTGCCCCAACGAAGCCCCAGG 47757 Query 75784 TCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGG 75843 || | || | || || |||||||| ||||| | ||| ||||| || | || Sbjct 47756 ACTTGCTGATGTTCATGGCGAAGAGTTTGAGGCCCTGTTCACGAAGTACGAGAACGAAAA 47697 Query 75844 TAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGAC 75903 | || || |||||| || || | ||||| | || |||||| | | || | Sbjct 47696 ACGTGCTAAGAAGACTGTTCCTGCTCAGAAACTTTGGTATGCGATTCTCGAGGCCCAAAT 47637 Query 75904 GGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939 ||||||||| ||||| |||||||||||||||||| Sbjct 47636 CGAGACTGGAGGACCATTTATGCTTTACAAGGATGC 47601 Score = 89.7 bits (98), Expect = 6e-13 Identities = 171/252 (68%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280 ||| ||||||| |||||| | ||||| || || || |||||||| |||||| ||||| Sbjct 48426 ATGATCATGCGTGTCGCAGTTGGCATTCATGGCGATGACATTGAACGTGTCTTAGAGACG 48367 Query 75281 TACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 75340 || | |||||| | | |||| ||||| | || || ||||||||||||||| Sbjct 48366 TATAATCTGATGTCTGAGCGCTACTTCACACACGCTTCGCCTACTCTCTTCAATGCTGGT 48307 Query 75341 ACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 75400 ||||| || || | | || |||||| | || ||||| || ||||| | Sbjct 48306 ACACCTCATCCACAACTCAGCTCGTGTTTCCTTGTTTGCATGAAGGATGATTCAATTGAT 48247 Query 75401 GGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGG 75460 ||||| |||| || || | | | |||||| ||| ||| ||||| || ||||| Sbjct 48246 GGTATTTATGATACCCTCAAGCAATGTGCGATGATCAGCAAGACTGCTGGAGGCATTGGC 48187 Query 75461 ATGCACATCCAT 75472 | |||||||| Sbjct 48186 CTCAACATCCAT 48175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596552187624800