Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq666 105 1e-17 seq641 87.8 3e-12 >seq666 Length=522490 Score = 105 bits (116), Expect = 1e-17 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 193150 GTACC-AGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 ||||| ||||| | |||| || || |||||| || || || | || | | ||| Sbjct 282814 GTACCGAGATGAAGGGTAGATTCCTTCTGAATATTGTAATCAGAAAGTGTACGACCATCT 282873 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | ||||||||||| || || || | || || ||||| || || ||||| |||||| Sbjct 282874 TCGAGCTGTTTTCCGGCGAAGATCAAACGTTGCTGGTCAGGGGGAATACCTTCCTTATCT 282933 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 || || |||||||| | ||| || |||||||| ||||| || || || || || || Sbjct 282934 TGGATCTTGGTTTTGACATTGTCGATGGTATCGGAGGACTCCACCTCAAGGGTGATGGTC 282993 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || | || |||||||| || |||||| Sbjct 282994 TTCCCAGTCAAGGTCTTTACAAAAATCTGCATT 283026 >seq641 Length=242067 Score = 87.8 bits (96), Expect = 3e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 193155 AGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAAT 193214 ||||||| ||| | || || |||||||| ||||| | |||| ||| || | | Sbjct 74294 AGATGCAGTGTCGATTCCTTCTGTATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGT 74235 Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || || || || || | | |||||||||||||| || || || || ||||| || Sbjct 74234 TGCTTGCCAGCGAAGATAAGACGTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATC 74175 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | || | || || || || ||||| |||||||| || |||||||| || || Sbjct 74174 TTCGCCTTAACGTTATCGATCGTGTCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCC 74115 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || | || || ||||| || ||||| Sbjct 74114 GTCAAAGTCTTGACAAAGATCTGCAT 74089 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||| | || | ||||| || || |||||||| | || | | Sbjct 74075 CGAAGGACGAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCA 74016 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || || || || | | |||||||||||||| || || |||||| Sbjct 74015 TCCTCGAGTTGTTTGCCTGCGAAGATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTA 73956 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || ||||| | || | || || ||||| || ||||| || || || || ||| Sbjct 73955 TCCTGGATTTTAGCCTTGACGTTGTCGATGGTATCTGATGACTCGACCTCAAGGGTGATA 73896 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || ||||| Sbjct 73895 GTCTTGCCAGTCAGAGTCTTGACGAAGATCTGCAT 73861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899628141337200