Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Termitomyces_20sp._20J132_20[genbank_20GCA_5F001263195.1_202015-08- 10] 2,335 sequences; 67,296,805 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq641 89.7 1e-12 >seq641 Length=242067 Score = 89.7 bits (98), Expect = 1e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||||||||| || | ||||| |||| || | ||| || ||||| ||||| | | Sbjct 74270 ATATTATAATCGGAGAGGGTTCGCCCATCCTCAAGTTGCTTGCCAGCGAAGATAAGACGT 74211 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 ||||||||||| || || || || || ||||| || || || || ||| || | Sbjct 74210 TGTTGATCAGGAGGAATACCCTCCTTGTCTTGAATCTTCGCCTTAACGTTATCGATCGTG 74151 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || ||||| ||||| || || || || || || || || || || | ||| |||||| Sbjct 74150 TCAGAAGATTCAACTTCAAGGGTTATAGTCTTGCCCGTCAAAGTCTTGACAAAGATCTGC 74091 Query 192535 AT 192536 || Sbjct 74090 AT 74089 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 192346 TCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAG 192405 ||||| ||| || || || || | || ||| |||| || | |||||| || || ||| Sbjct 74051 TCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCCTCGAGTTGTTTGCCTGCGAAG 73992 Query 192406 ATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465 || | | ||||||||||| || || || |||||||| || |||||| || || || Sbjct 73991 ATGAGACGTTGTTGATCAGGAGGGATACCCTCTTTATCCTGGATTTTAGCCTTGACGTTG 73932 Query 192466 GTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATA 192525 || | |||||| || || || || || || || || || ||||| | || || | Sbjct 73931 TCGATGGTATCTGATGACTCGACCTCAAGGGTGATAGTCTTGCCAGTCAGAGTCTTGACG 73872 Query 192526 AATATCTGCAT 192536 || |||||||| Sbjct 73871 AAGATCTGCAT 73861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984450547127250